Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00567 ATGGCAATTAACATTTTGAACCCTCAAAAGGCTCAAGCAAGCCCTTCTAATCTTTCAATTTTCGAAGTTCTTGATTTTCCACATCTTCTCATGGCCACCAACCTCAACATGCTCCTCAAGTTCCTGTCTTTGTTGGTGTTCCTTCTGATCCCAGTTTCATCTCAGCAAAACCAGCTTTTCTATGCTGGATTCAAGGGTTTGAAAAGCAACAACATGACCCTTGATGGGGTAGCAGAAATAGAGCCAAATGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTGATGGGTCATGCTTTTTATCCAACCCCTTTTAGGTTCAAGAACTCTAGTGGTGGTGGTAATAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCAGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCCTTTGCAATTGCACCTACTAAGGAACTGAAGGCTCATCCAAGCCAGTATCTTGGTCTTCTTGACTCAACTGGCATAGGGAACTTCTCCAACCACCTCTTTGCTGTTGAGTTTGACACAGCCAAAGATTTTGAGTTTGGAGATATTGATGACAACCATGTTGGAATTGACATCAATAGTTTGTCCTCCATTGCTTCTGCATCTGCAGGTTACTACTCTGGAGATGAGGATTCAACCAAACAGAATGTCACCCTCCAAAGTGGGGTACCTATTCTAGCTTGGGTTGATTATGATGCTGCTCAAAGTGTGGTCCATGTCACAATTTCTGCATCTTCTACCAAACCAAAAAGGCCACTCTTGTCCTATCATGTGGATCTTTCACCAATCTTTGAGGATTTAATGTATGTTGGGTTCTCTGCATCAACAGGGATGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAGATCAATGGGCCAGCTCTACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCAGGGCCAAAGAAGAAACACACGTCTCTGATAATTGGGGTTTCAGCCTCTGTTGTTTTTCTTGTATTGTGTGCTGTCTTATTAGGCATCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGGCCACATAGGTACTCCTACCAAGAACTCAAGAAAGCAACAAAAGGGTTCAAGGATAAAGGGCTGCTTGGACAAGGTGGGTTTGGTAGTGTTTACAAAGGAACATTGCCAAATTCCAATACCCAAGTTGCTGTTAAGAGAATTTCACATGACTCCAATCAAGGCCTTAGGGAATTTGTGTCAGAAATAGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAGCTGCTGGGGTGGTGTCGCCGCCGTGGTGACCTCCTCCTTGTGTATGACTTCATGGAAAATGGGAGTTTAGACAAGTACTTGTTTGATGAGCCAGAAATAGTCTTAAGTTGGGAGCAAAGGTTTAAGGTCATCAAGGATGTTGCTTCAGCCCTTTTGTATCTTCATGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCTAGCAATGTGCTTCTAGATGGTGAACTCAATGGAAGATTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGACTAACCCAAGTACCACAAGGGTGGTTGGAACCTTGGGCTATTTGGCACCCGAGGTGCCTAGGACAGGGAAGGCAACTCCTAGCTCCGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGACTCAGACCACTTGAGCCAAAGGCAATGCCGGAAGATATGGTTTTGGTTGATTGTGTTTGGAACAAATTCAAACAAGGGAGCATACTCGATTTGGTGGACCCTAAACTAAATGGTGTTTTTAATGAAAGAGAGATGCTCATGGTGTTGAAATTAGGGCTTCTGTGTTCAAACAGTTCACCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGATTTTTAGAAGGAGAAGTTGGCGTGCCAGATGAGTTGAAAAAGCCGGGAGAGGGAGGTTACCAGGAGGGTTTTGATGAATTCGTGCACTCACTTGAATCTTCTTCATTTGATCAGATGAGCACAGGTTCATATGGTAGAACTAGAGACATGGATTCTAGTTTTCCTTCTTTAACTGATACATCTCTTTTTAGTCCCCATGGTAAAGGACAAACAATGTGA 2160 0.4398 MAINILNPQKAQASPSNLSIFEVLDFPHLLMATNLNMLLKFLSLLVFLLIPVSSQQNQLFYAGFKGLKSNNMTLDGVAEIEPNGVLKLTNDSSKVMGHAFYPTPFRFKNSSGGGNKAFSFSSSFALAIVPEFPKLGGHGLAFAIAPTKELKAHPSQYLGLLDSTGIGNFSNHLFAVEFDTAKDFEFGDIDDNHVGIDINSLSSIASASAGYYSGDEDSTKQNVTLQSGVPILAWVDYDAAQSVVHVTISASSTKPKRPLLSYHVDLSPIFEDLMYVGFSASTGMLASSHYILGWSFKINGPALPLDLSSLPQLPGPKKKHTSLIIGVSASVVFLVLCAVLLGIYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKGLLGQGGFGSVYKGTLPNSNTQVAVKRISHDSNQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMENGSLDKYLFDEPEIVLSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGTNPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLEPKAMPEDMVLVDCVWNKFKQGSILDLVDPKLNGVFNEREMLMVLKLGLLCSNSSPTARPSMRQVVRFLEGEVGVPDELKKPGEGGYQEGFDEFVHSLESSSFDQMSTGSYGRTRDMDSSFPSLTDTSLFSPHGKGQTM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00567 719 Gene3D Phosphorylase Kinase; domain 1 364 455 - -
Gma03g00567 719 SUPERFAMILY Protein kinase-like (PK-like) 361 657 IPR011009 -
Gma03g00567 719 ProSitePatterns Protein kinases ATP-binding region signature. 385 408 IPR017441 GO:0005524
Gma03g00567 719 CDD lectin_legume_LecRK_Arcelin_ConA 61 300 IPR001220 GO:0030246
Gma03g00567 719 CDD STKc_IRAK 385 651 - -
Gma03g00567 719 ProSiteProfiles Protein kinase domain profile. 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00567 719 Gene3D - 58 299 - -
Gma03g00567 719 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 38 703 - -
Gma03g00567 719 Pfam Legume lectin domain 58 309 IPR001220 GO:0030246
Gma03g00567 719 SMART serkin_6 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00567 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Gma03g00567 719 Pfam Protein kinase domain 380 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00567 719 MobiDBLite consensus disorder prediction 686 719 - -
Gma03g00567 719 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 302 IPR013320 -
Gma03g00567 719 Gene3D Transferase(Phosphotransferase) domain 1 456 661 - -
Gma03g00567 719 PANTHER - 38 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00567 Gma-Chr3 15823550 15825868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00567 52 718 Receptor kinase-like Gene Family AT3G55550 58.504 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma03g00567 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00567 - - gmx:100807337 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00567 03 15823550 15825868 Gma18g00344 18 2896926 2898992 ECH
Gma03g00567 03 15823550 15825868 Gma11g02234 11 37665904 37668257 ECH
Gma03g00567 03 15823550 15825868 Gma03g00567 03 15823550 15825868 ECH
Gma03g00567 03 15823550 15825868 Gma07g01427 07 19303987 19306077 PCT