Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00563 atggagaaaggtacaagtcttcctatggagaaagTTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTTAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCGGATCATCCACACCGAGGTTTTGAAATCGTCACCTACATGCTAGAGCTAGCTGGCATTCTTTTGGATACTGCGAATCTAAGGGACCCTCGTTGCTCCTCTAAAGATAAGTACATGGCTTCATTATTGATCAATGGTGCTCCTATAATCACAAGGGCAGATTCAAGGTCAGTGCAAATTGGCATGAGTTGTATCGGAATTTCAATCGGACAGCTTCTTTCTCACGCAGAAAATCTAGCTCAAGAAATAACACGCTTCCAGTTATCTGAGAAACTTCGAGCACTTATTGTCGTTTCGGGGTATTATAACGATGAAAAGAACTTCAAGAGAGAAGTTTTAATATCTATGGAATCTGCAAAGCAATTGGAGAAGCTTACACTTTCCAGTGCAGAAGTGGCCATGGAAGCTGCAATAGCAGGTGGCATTTCAGTTTTGGAGATTGTGGTGTCGACCTCAGGTGTGTTTGAGGTTGTTTACCTAAATTTTTCTACTTCCTTACTAGTCTTGTTCTTAGATTTAGAATTCATATGCTTGAGATTGTGGTGTCGACCTCAGGTGTGTTGA 738 0.4051 MEKGTSLPMEKVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFEIVTYMLELAGILLDTANLRDPRCSSKDKYMASLLINGAPIITRADSRSVQIGMSCIGISIGQLLSHAENLAQEITRFQLSEKLRALIVVSGYYNDEKNFKREVLISMESAKQLEKLTLSSAEVAMEAAIAGGISVLEIVVSTSGVFEVVYLNFSTSLLVLFLDLEFICLRLWCRPQVC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00563 245 Pfam Pirin 30 74 IPR003829 -
Gma03g00563 245 PANTHER PIRIN-RELATED 11 80 IPR012093 -
Gma03g00563 245 SUPERFAMILY RmlC-like cupins 12 74 IPR011051 -
Gma03g00563 245 SUPERFAMILY DHH phosphoesterases 75 161 IPR038763 -
Gma03g00563 245 Gene3D DHHA2 domain 102 201 IPR038222 -
Gma03g00563 245 Gene3D Jelly Rolls 19 87 IPR014710 -
Gma03g00563 245 PANTHER PIRIN-LIKE PROTEIN 11 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00563 Gma-Chr3 15764914 15771017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00563 12 89 Calmodulin-binding Proteins AT3G59220 58.974 4.35e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00563 K06911 - gmx:102668539 433.335