Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00562 ATGGATAATTTGTTATGTGATGAGGTGTGGCTTTCAAAGTCTTCAAATACTTTTGAAGAAGTTAGTGACCCTGTTGCACTAAAGAGTTATGAAAATGAAGAGTTTGAAGAGGCTTTTGCAGTGTGTCTAGAGAAGGAGGTCTCTTTCTTGCCCGAATCTGACTACACAAAGTACTTACACTCCAACAATTTGATTTTTCCTAGGTGTAGAGTTATTCAATGGTTTATCAAGTGTAGAAGTCGCTTTAATATTTCTTTTGGGACAGTCTTCTTGGCTGTTAATTATCTTGATCGCTTTGTATCGATTTGTCAATGCCATGATTGGGAATACTGGATGCTTGAATTGATTTCTATTGCATGTTTATCAATTGCCATAAAGTTCAATGAGATGTCAGCACTTTCGTTGCATGAAATTCAGGTGGAGAATTTGGACTACTCATTCCAATCAAATGTAATTTTGAAAATGGAGCTGATCCTGTTGAAGGTGTTGGGGTGGCGCCTTAACTCTGTGACAAGTTTTTCTTTTGTAGAAATGCTAAGTGTTGGTTTCTTGGAACCTCATCTTCATGAGAAGTTTATTTCACGAGTCATTGATCTCCTTATCCAAGCTACTTTAGATCAGAAAATGCTGGAATTCAGGCCAAGCATTGTTGGTATATCTGCATTGTGGTGCACTCTAGACCAGTTATTTCCACCAAAATCAGACACTTACATTGCTTATATTATGAGTATCTTAAACCAAAGTCAGAAGGATGATATCATCAAGTGCCATAAGTTGATGGAAACACAGACTTCAATGCGTTGTGAAAATCACCATTGTTACTGCCCTTTAAGCCCAACAACAGTACTATATATTGAACACGCATGA 867 0.3725 MDNLLCDEVWLSKSSNTFEEVSDPVALKSYENEEFEEAFAVCLEKEVSFLPESDYTKYLHSNNLIFPRCRVIQWFIKCRSRFNISFGTVFLAVNYLDRFVSICQCHDWEYWMLELISIACLSIAIKFNEMSALSLHEIQVENLDYSFQSNVILKMELILLKVLGWRLNSVTSFSFVEMLSVGFLEPHLHEKFISRVIDLLIQATLDQKMLEFRPSIVGISALWCTLDQLFPPKSDTYIAYIMSILNQSQKDDIIKCHKLMETQTSMRCENHHCYCPLSPTTVLYIEHA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00562 288 Pfam Cyclin, C-terminal domain 170 264 IPR004367 -
Gma03g00562 288 Gene3D - 42 258 - -
Gma03g00562 288 CDD CYCLIN 68 160 IPR013763 -
Gma03g00562 288 PANTHER CYCLIN-D7-1-RELATED 25 282 - -
Gma03g00562 288 Pfam Cyclin, N-terminal domain 39 168 IPR006671 -
Gma03g00562 288 Gene3D - 52 168 - -
Gma03g00562 288 PANTHER CYCLINS 25 282 IPR039361 -
Gma03g00562 288 SUPERFAMILY Cyclin-like 33 168 IPR036915 -
Gma03g00562 288 SMART cyclin_7 73 161 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00562 Gma-Chr3 15760288 15763408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00562 37 276 Core Cell Cycle Gene Families AT1G70210 28.854 4.22e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00562 K18813 - gmx:100792420 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00562 03 15760288 15763408 Gma03g00562 03 15760288 15763408 ECH