Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00561 ATGGCCAACCTCAACATGCTCCTCCAACAATTCTTGCATGTGTTGTTGTTCCTTCTGATCCCTGTTTCATCTCAGCCTAACCAGCTCTTCTATGATGGATTCTTGGGAAGCAACATCATGTCCCTTAGAGGAGTAGCAGAAATAGAGTCAAATGGGATACTGAAACTCACAGATGATTCAAGTAGAGTAGTGGGTCAAGCTTTTTATCCAACTGGTTTAAGGTTCAAGAACTCTAGTGATGGTAAAGCTTTCTCCTTTTCTTCTTCTTTTGCTTTGATTATATTCCCTGAGTATGAAAAGTTAGGAGGGCATGGTCTTGCTTTTACAATTGCATCTTCTAAGAATCTCAAGGCTCTTCCAAGTCAGTATCTTGGTCTTCTAAACTCAACTAGCACAGGGAACTCCTCCAACCACCTCTTTGCTGTTGAGTTTGACACTGCCCAAGATTTTGAGTTTGGGGACATTGATGACAACCATGTTGGAATTGACATCAATAGCTTGGTCTCCATTGCTTCTGCACCTGTAGGTTACTACACCGGGGGTGATGATAATTCAACCAAACAGAATCTCACGCTCACAAGTGGGGAACCCATTATAGCTTGGGTTGATTATGATGCTTCTCAAAGTGTTGTCAATGTTACAATTTCTGAATCTTCTACCAAACCAAAGAGACCTCTCTTGTCCCATCATGTGGACCTTTCACCAATCTTTGAGGATTTAATGTTTGTTGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAGATCAATGGACCAGCTCCACCCCTTGAGCTCTCTTCTCTCCCACAGCTTCCAGGCCCAAAGAAGAAACACACATCTCTGATAACTGGGGTTTCAATTTCTGGTTTTCTTGCATTGTGTGGTTTCTTATTTGGCATCTACATGTACAGGAGGTACAAGAATGCTGATGTCATAGAAGCTTGGGAGCTTGAGATTGGGCCACATAGGTACTCCTATCAAGAGCTCAAGAAAGCAACAAAAGGGTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGGTTTGGTAGTGTTTACAAAGGAACATTGCCAAATTCCAATACCCAAGTTGCTGTTAAGAGAATTTCACATGACTCCAAACAAGGCCTTAGGGAATTTGTGTCAGAAATAGCCAGCATAGGCTGGCTTCGCCACCGGAATTTGGTTCCGTTGCTGGGGTGGTGTCGCCGCCGTGGTGACCTCCTCCTTGTGTATGATTTCATGGAAAATGGGAGCTTAGATAAGTACTTGTTTGATGGGCCAAAAACAATCTTAAGTTGGGAGCAAAGGTTTAAGGTCATCAAGGATGTTGCTTCAGCCCTTTTGTATCTTCATGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCTAGCAATGTGCTTCTAGATGGTGGACTCAATGGAAGATTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGGCTAACCCAAGTACCACAAGGGTGGTGGGGACCTTTGGCTATATGGCACCTGAGGTGCCTAGGACAGGGAAGTCCACTCCTAACTCAGATGTTTTTGCATTTGGTGCACTTTTACTAGAAGTGGCATGTGGGCTCAGACCACTTGAGCCAAAGGCGTTGCCAGAAGATGTGGTTTTGGTTGATTGTGTGTGGAACAAGTACAAACAAGGGAGAATACTTGATTTGGTGGATCCTAAACTAAATGGTGCTTTTAATGAAAGAGAGGTTCTCATGGTGTTGAAATTGGGAATTCTATGTTCAAATGCCGCACCCGCGGCTAGGCCGAGCATGAGACAGGTGGTGAGGTTTTTGGATGGAGAAGTTGGATTGCCAGATGAGTTGAGAAAGCCAGAAGAGGTAGGATATCAGGAGGGTTTTGATGAATTCATGAACTCACTTGAACCTTCTTCCTTTTATCAGATGAGCACAAGTTCCTATGCTATAAAGACTGACATGGATGCTAGGTTTCCTTTTATTGATACATCACTTTATACTCTCCATGCTAGAGGAGAAACAAGCTTAACTTCAAGTTCAGCCACTGATCTCAATGTTCTTGACCTCAAGCTTCTTCTCAAGCACCTTAGGAGCAGTAACACTGAGCACATCATTTAA 2145 0.4368 MANLNMLLQQFLHVLLFLLIPVSSQPNQLFYDGFLGSNIMSLRGVAEIESNGILKLTDDSSRVVGQAFYPTGLRFKNSSDGKAFSFSSSFALIIFPEYEKLGGHGLAFTIASSKNLKALPSQYLGLLNSTSTGNSSNHLFAVEFDTAQDFEFGDIDDNHVGIDINSLVSIASAPVGYYTGGDDNSTKQNLTLTSGEPIIAWVDYDASQSVVNVTISESSTKPKRPLLSHHVDLSPIFEDLMFVGFSASTGLLASSHYILGWSFKINGPAPPLELSSLPQLPGPKKKHTSLITGVSISGFLALCGFLFGIYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSKQGLREFVSEIASIGWLRHRNLVPLLGWCRRRGDLLLVYDFMENGSLDKYLFDGPKTILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGGLNGRLGDFGLARLYEHGANPSTTRVVGTFGYMAPEVPRTGKSTPNSDVFAFGALLLEVACGLRPLEPKALPEDVVLVDCVWNKYKQGRILDLVDPKLNGAFNEREVLMVLKLGILCSNAAPAARPSMRQVVRFLDGEVGLPDELRKPEEVGYQEGFDEFMNSLEPSSFYQMSTSSYAIKTDMDARFPFIDTSLYTLHARGETSLTSSSATDLNVLDLKLLLKHLRSSNTEHII 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00561 714 SUPERFAMILY Protein kinase-like (PK-like) 327 647 IPR011009 -
Gma03g00561 714 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00561 714 Gene3D - 30 273 - -
Gma03g00561 714 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Gma03g00561 714 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 662 - -
Gma03g00561 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Gma03g00561 714 Pfam Protein tyrosine and serine/threonine kinase 348 615 IPR001245 GO:0004672|GO:0006468
Gma03g00561 714 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 285 IPR013320 -
Gma03g00561 714 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Gma03g00561 714 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00561 714 Pfam Legume lectin domain 30 277 IPR001220 GO:0030246
Gma03g00561 714 CDD STKc_IRAK 351 617 - -
Gma03g00561 714 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Gma03g00561 714 PANTHER - 9 662 - -
Gma03g00561 714 CDD lectin_legume_LecRK_Arcelin_ConA 31 267 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00561 Gma-Chr3 15727042 15730515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00561 40 666 Receptor kinase-like Gene Family AT3G55550 56.528 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma03g00561 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00561 - - gmx:100808942 1301.19