Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00558 ATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCGTTTCCCCTCTGATGCGGCACCAATTGCTTCCACATGTCACTCTCCCTCTCGCCTCTCTCTTTCCCTCTCGCACTCCCCTCTCTTCACAACAACACCAAAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTCTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCGAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCATTGGGTTTCGGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGCTGGGAAGGCTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCCACCGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCAGTGGAATTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCCTAAGAGCAGGCCTTGCTCTTGCTGAACATGCATCATCGATCTTGCCTGCAACAAAAACATATCATTTAGGAATAAGCAGAGATGGGGAAACTCTTCAGCCCACTATATATTTAAACAAGTTACCCGGGAAATTTCCAGAAGGATCTAAAGTTTTTGTGGTTGATCCTATGCTGGCAACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTTTCTGCCCCTCCTGCTCTTCAAAAGCTGAGCGAGCAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGTAGCTTTGGTACAGATACATGA 870 0.4805 MACSRIHFNLNLRFPSDAAPIASTCHSPSRLSLSLSHSPLFTTTPKIAYSSAPRRTCGAVCSQMTMEEKPLSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRDGETLQPTIYLNKLPGKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00558 289 CDD PRTases_typeI 143 263 IPR000836 -
Gma03g00558 289 Pfam Uracil phosphoribosyltransferase 80 287 - -
Gma03g00558 289 SUPERFAMILY PRTase-like 78 286 IPR029057 -
Gma03g00558 289 PANTHER URIDINE KINASE 46 283 - -
Gma03g00558 289 TIGRFAM upp: uracil phosphoribosyltransferase 78 287 IPR005765 GO:0004845|GO:0006223
Gma03g00558 289 Gene3D - 65 287 IPR029057 -
Gma03g00558 289 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 46 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00558 Gma-Chr3 15623358 15635117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00558 1 289 PRT Gene Family AT3G53900 66.441 6.45e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00558 K00761 - gmx:100797953 564.688