Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00556 ATGGCGCAGGCGGCGGGGCGGAGCAGGGTGGTGGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCGGTTGTGTGGCACGGGAGGCACAAGGTGCACGGGACCGAGGTGGCGATCAAGGAGATCGCCACGCTTCGCCTCAATAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTCTTTGCACGATATCATAAATCAGGTTCATGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGAGATCTTTCCTTGTACATCCAACGCCACGGAAAGGTACCAGAGGCAACTGCCAAACATTTTATGCTGCAGCTGGCTGCTGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCTCGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAATATGATGCTAAGGCAGATCTTTGGAGTGTTGGTGCAATCCTATTTCAGCTTGTTACAGGAAGAACGCCTTTCACTGGAAACAATCAAATACAGTTACTACAAAATATTATGAAATCAACAGAATTGCAGTTTCCGTCTGATAGCCAAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTCAGAAGCAAACAGAACAGGATGAGCCATTGAGGAATCGAAGTTCTCCAAGGCTGGTTGGTGGGTTTTGTTCTACAGGGTCTGACCCTTTGAGAAGAACTGAGGAAAATTATCAAGAAGATTGTTTGCCTTTCATGTTAGATGATGACTCTAGTGGCCCGGAGGGGAGTCCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGATCTAAATGCTAAACTAGATAAAGCGGAGTCATCATCTCCTATTTCTAATAACATAAATCATACTTCTGGATTTGGTAGTGTGACACAGAGATCTGAAAACACTACTAAAAGATTGGACAACCATAAAATTTCTAGAAATCTCACTAATCCTCTAGAATCTCCAGAACAGCTATTCACAAGTCCTTATCCAAAAGCAGTTACGGATTCACTGGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGGCCCCCTATAGATGTTTCATCTTCTTCAGTGGGTGCTTCAAGGCCCAGCCATACCCCATATCGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCACTAGACTAAGTGTTCCAATGCCAATAGTTGGTGTACCTTCCAATAGCATATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACATCGCTTGGATCAATGGATACTGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGTGTGCATCTTCCATCACGGAGTTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTGGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTGCATATATGCCATACACAAGCTGCATCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGCACCAGCAGGAAGCATGGCAGTCCTGATTCAGAAGAATGCCTTGATGGAAACACCCTAGGGCCGAAGGATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCCGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCCGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTCATGGGAGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTTTAGTTGAGGGACCATCCCTGATTCTTAATCCTCCATTTTCACTGACAAACTCAGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCCCAGCGAATGACACTACTGAAATGTGATGACAGTCGAGGTAAAACATGA 2193 0.4405 MAQAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIINQVHGKIHLVLEYCKGGDLSLYIQRHGKVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSQSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQTEQDEPLRNRSSPRLVGGFCSTGSDPLRRTEENYQEDCLPFMLDDDSSGPEGSPSFSRKKSSMKSTYGFDLNAKLDKAESSSPISNNINHTSGFGSVTQRSENTTKRLDNHKISRNLTNPLESPEQLFTSPYPKAVTDSLENIDQEYVLVSGPPIDVSSSSVGASRPSHTPYRSGSLPQESSSTITRLSVPMPIVGVPSNSICQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASSITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGSPDSEECLDGNTLGPKDILSQIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSRGKT 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00556 730 MobiDBLite consensus disorder prediction 274 304 - -
Gma03g00556 730 MobiDBLite consensus disorder prediction 354 379 - -
Gma03g00556 730 ProSiteProfiles Protein kinase domain profile. 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00556 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gma03g00556 730 MobiDBLite consensus disorder prediction 576 590 - -
Gma03g00556 730 SMART serkin_6 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00556 730 MobiDBLite consensus disorder prediction 434 457 - -
Gma03g00556 730 MobiDBLite consensus disorder prediction 390 406 - -
Gma03g00556 730 MobiDBLite consensus disorder prediction 481 501 - -
Gma03g00556 730 MobiDBLite consensus disorder prediction 481 506 - -
Gma03g00556 730 Gene3D Transferase(Phosphotransferase) domain 1 5 301 - -
Gma03g00556 730 MobiDBLite consensus disorder prediction 562 599 - -
Gma03g00556 730 Pfam Protein kinase domain 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00556 730 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 708 IPR045269 GO:0004674|GO:0006914
Gma03g00556 730 MobiDBLite consensus disorder prediction 316 338 - -
Gma03g00556 730 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 708 - -
Gma03g00556 730 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gma03g00556 730 MobiDBLite consensus disorder prediction 354 406 - -
Gma03g00556 730 SUPERFAMILY Protein kinase-like (PK-like) 10 442 IPR011009 -
Gma03g00556 730 CDD STKc_ATG1_ULK_like 20 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00556 Gma-Chr3 14252282 14271858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00556 10 279 CBL-interacting serine-threonine protein kinases AT2G30360 36.232 6.39e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gma03g00556 Pkinase 4.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00556 K08269 - gmx:100791596 1422.53