Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00540 ATGGAAACAAAGAAATGGTGGCATTAGAAACAATGAATGTTGTTGGTTCCCTGACTTCGTGTTATGTAGCAACAGGTAAGCTCAAAAACAAGCTAGCCGCTGATCTATATTCTTGTTACCAAACTGCAGTCTCTAATATTGTGTTGTCAGTGGTTGTGTTATTAACCCTGGAATTCATGACTCCTCTTTTCAAGTACACCCCTAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCCGCCTTGTCTCTATTTCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCCCGAACTGCTATTCTAGGGAAGATTCCTAGGACTACTGTCTATAGAAACATTCAACAATATCCAGAAGCTAGTAAGATTCCAGGTGTACTGATTGTAAGAGTCGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAACAAAGGACATTAAGATGGTTCATGGACGAAGAAGAACAAGAAAAAGGAGACTACCGCACAAAAATCCAGTTTTTCATACCGTTAACCGACATAGACACAAGTGGCATCCAAGCCTTTCAAGAGTTACACAGCAGTCTTGAGAAGAAGGGCGTTGAGCATATTATAGTATCTTACCGTAAGTTGTTCCTTTTGTACAAGCTTGTTTTGGCAAATCCTGGGCCAGCAGTGACAGACAAGCTTTACGCATCCAGTTTTGCCAACACGATTGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGTTGTTGCATATTGTTCTCCAAAGCTGGTTGAGGACCCTTGA 776 0.4111 GNKEMVALETMNVVGSLTSCYVATGKLKNKLAADLYSCYQTAVSNIVLSVVVLLTLEFMTPLFKYTPNAILSAIIISAVIRLVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKIPGVLIVRVDSAIYFSNSNYVKQRTLRWFMDEEEQEKGDYRTKIQFFIPLTDIDTSGIQAFQELHSSLEKKGVEHIIVSYRKLFLLYKLVLANPGPAVTDKLYASSFANTIGEDKIFLTVAEVVAYCSPKLVEDP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00540 257 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 1 83 - -
Gma03g00540 257 PANTHER SULFATE TRANSPORTER 1 83 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma03g00540 257 ProSiteProfiles STAS domain profile. 116 249 IPR002645 -
Gma03g00540 257 SUPERFAMILY SpoIIaa-like 118 250 IPR036513 -
Gma03g00540 257 PANTHER SULFATE TRANSPORTER 83 257 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma03g00540 257 Pfam Sulfate permease family 2 95 IPR011547 GO:0016021
Gma03g00540 257 CDD STAS_SulP_like_sulfate_transporter 117 242 - -
Gma03g00540 257 Gene3D STAS domain 96 252 IPR036513 -
Gma03g00540 257 Pfam STAS domain 117 202 IPR002645 -
Gma03g00540 257 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 83 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00540 Gma-Chr3 10950246 10951945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00540 1 255 Inorganic Solute Cotransporters AT4G08620 50.336 6.51e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00540 K17470 - gmx:100804208 358.992