Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00517 ATGGTTATTTTCATGCAAGAACAATCCGTTACTAAGCAGTGCCTATTAGACCATGGTCTCACTCCAAACCACACTCTACGCAGGCTGATCCAATCCTGGTGCACCCTCAATGCCTCACTTGGAGTTGAACGCATTCCTACTCCAAAGTCACCAATAGGCAAAACTGAGATTGTGAAACTCCTCACAGAAGCAAAAGGGTTCCCAGAGAAGCAACTCAAGTGCCTCACAAGGCTTCGATCCGTTGCCTTTGAAGGCCAAAGGAACAAAACATGTTTAGAGTCTGTTGGAGTAATAGAATTCTTGGCCACAACAATGAATATATCAGCACCAATATTGTGGGGAAAAGATTCAGTCCACATGGGCGTAATTATTTGCGAGTATTTCACCCACCTTTTCACTCTTTTCTGA 408 0.4387 MVIFMQEQSVTKQCLLDHGLTPNHTLRRLIQSWCTLNASLGVERIPTPKSPIGKTEIVKLLTEAKGFPEKQLKCLTRLRSVAFEGQRNKTCLESVGVIEFLATTMNISAPILWGKDSVHMGVIICEYFTHLFTLF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00517 135 PANTHER WDSAM1 PROTEIN 9 105 IPR045185 GO:0061630
Gma03g00517 135 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 9 105 - -
Gma03g00517 135 ProSiteProfiles U-box domain profile. 1 40 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00517 Gma-Chr3 10027416 10027823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00517 10 106 U-box Gene Family AT2G35930 61.856 2.01e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00517 - - gmx:102664504 257.299