Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g00487 | ATGCGAAAGTCCTTCAAGGATTCCCTCAAAGCTCTTGAAGCTGACATTCAGTTCGCGAATACTCTGGCTTCTGATTGTCCAAGAGAATCTGATGGCGCCTCCATACAAATGAGATTGTCTTACAGCCCAGCTGCTCAATTTTTCCTTTTTCTGGTTCAGTGGACTGATTGTCACCTTGCTGGAGTTTTGGGATTGCTGAGAATTCTCATATATAAGGTATATGAAGATGGGAAGACAACCATGTCCATTTATGAAAAGAAAGCCAGTTTGAAGGAATTCTATGGTGTGATCTTTCCCTCTTTACTACAACTCCACAGAGGAATCAGTGATGTAGAAGAAAGAAAACAGAAAGATTTATGTGCTACAAAGTACAAGCCAAGAGATATAATAAGAAGAGGAAAATCATCTGAAATTGATATAGAGAGAGAAGAAGAATGTGGTATTTGCATGGAGATGAACAACAAGGTTGTGCTGCCCAATTGCAACCACTCGTTATGTATGAAATGCTACAGAAACTGGCATGCACGATCTCAATCTTGCCCTTTCTGTCGGGACACTCTTCAAAGAGTAAACTCTGGTGACCTTTGGATCTACATGAACAGCAATGAGATAGATGACTTAGCTTCAATCAACAAGGAGAATCTAAAAGGACTATTTATGTACATTGACAAGTTACCTCTAATTGTGCCAGATCCTATATTCATGTCCTATCCTCAGCGCTTTCGATTTTTCCCTAATCAATTTGGGTCTGCATGA | 756 | 0.3981 | MRKSFKDSLKALEADIQFANTLASDCPRESDGASIQMRLSYSPAAQFFLFLVQWTDCHLAGVLGLLRILIYKVYEDGKTTMSIYEKKASLKEFYGVIFPSLLQLHRGISDVEERKQKDLCATKYKPRDIIRRGKSSEIDIEREEECGICMEMNNKVVLPNCNHSLCMKCYRNWHARSQSCPFCRDTLQRVNSGDLWIYMNSNEIDDLASINKENLKGLFMYIDKLPLIVPDPIFMSYPQRFRFFPNQFGSA | 251 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g00487 | 251 | ProSiteProfiles | Zinc finger RING-type profile. | 146 | 184 | IPR001841 | - | |
Gma03g00487 | 251 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 212 | IPR013083 | - | |
Gma03g00487 | 251 | SUPERFAMILY | RING/U-box | 136 | 189 | - | - | |
Gma03g00487 | 251 | PANTHER | RING FINGER PROTEIN 41, 151 | 1 | 241 | - | - | |
Gma03g00487 | 251 | ProSitePatterns | Zinc finger RING-type signature. | 161 | 170 | IPR017907 | - | |
Gma03g00487 | 251 | Pfam | Zinc finger, C3HC4 type (RING finger) | 143 | 189 | - | - | |
Gma03g00487 | 251 | SMART | ring_2 | 146 | 183 | IPR001841 | - | |
Gma03g00487 | 251 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE AIRP2 | 1 | 241 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g00487 | Gma-Chr3 | 8791490 | 8794513 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g00487 | 90 | 184 | C3H Transcription Factor Family | AT5G01960 | 31.000 | 9.49e-08 | 50.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g00487 | K25840 | - | gmx:100819267 | 479.174 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g00487 | 03 | 8791490 | 8794513 | Gma03g00487 | 03 | 8791490 | 8794513 | ECH |