Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00469 ATGGGTTCTCGAAACCATGAGGTATCAATGTTGATGGAGAATGGTGGTGGTGGGAACATCGTGAAGGGGTTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCATCTTCTTTGCACAAGAAATCTGACCTAACTCTTGTGTCTAAGGTTCACTCTATCCCCCTCAGGAATGTGTTGGTGAATTTGCAAGAGGTTGTTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCCCTTGCCGTTGTTGCTCAATGCTATGGCTTTGGAAGACCTTGGATTTTTGCATTGAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGTTTCTTGACAGAACAACTCGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCAATAACAAAATTCACGTGGTCAAGTATTCTCTACTGGGTTCCATCATTTCTAATCTTCTTCTGGTTCTCGGAACCTCTCTATTCTGTGGTGGCATTGCAAACATTAGAAAGGAGCAAAAATATGATAGAAGACAGGCAGATATAAACTTGCTCATGTTGTTTGTGGCACTGCTTTGCCACTTGCTGCCAGTGTTGTTCCATTATGTTGGTGCCTCAGCTGCTGACACTGCAGAGTCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTGTTATGGTGATTGCTTATTGCGCTTACCTCGTCTTCCAATTATGGACTCACCGGCAGCTATTTGAAGCCCAGGATGAAGTTGATGAAGAAGGTGGCAATGAATCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGGATGACTGTGATCATTGCTCTACTGTCTGAATATGTCGTGCAAACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCGATAATATTTGCCTTCAAGAACAAACTGGACATCTCGTTGGGTGTTTCCTTGGGTTCGGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATAATGGGAATCAAAATGGACCTCAACTTCAACATCCTAGAGACAGGTTCTTTTGCTGTGGCAATAACAATCACAGCCTTCACGTTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTACTCTGCTACATTGTTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCCAATGTTGCTAACATAACGCTTAAATCAGCTACCGAAGCAGTGTTTAGAGCTCAATAG 1356 0.4403 MGSRNHEVSMLMENGGGGNIVKGLSKEMRHGRTAHNMSSSSLHKKSDLTLVSKVHSIPLRNVLVNLQEVVLGTKLSILFPAIPLAVVAQCYGFGRPWIFALSLLGLTPLAERVSFLTEQLAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIHVVKYSLLGSIISNLLLVLGTSLFCGGIANIRKEQKYDRRQADINLLMLFVALLCHLLPVLFHYVGASAADTAESSLQLSRAASIVMVIAYCAYLVFQLWTHRQLFEAQDEVDEEGGNESEEAVIGFWSAFAWLVGMTVIIALLSEYVVQTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWIMGIKMDLNFNILETGSFAVAITITAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPSNVANITLKSATEAVFRAQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00469 451 Pfam Sodium/calcium exchanger protein 284 422 IPR004837 GO:0016021|GO:0055085
Gma03g00469 451 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Gma03g00469 451 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 440 - -
Gma03g00469 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 440 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma03g00469 451 Gene3D - 278 427 IPR044880 -
Gma03g00469 451 Gene3D - 126 277 IPR044880 -
Gma03g00469 451 TIGRFAM caca2: calcium/proton exchanger 61 427 - -
Gma03g00469 451 TIGRFAM cax: calcium/proton exchanger 80 427 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00469 Gma-Chr3 8387185 8391995 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00469 13 434 Antiporters AT2G38170 71.831 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00469 K07300 - gmx:100782052 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00469 03 8387185 8391995 Gma03g00469 03 8387185 8391995 ECH