Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00467 ATGGCTTCTCGAAACCATGAGGTATCAATGCTAAAGGAGAATGGTGGTGGTGGGAACAACCTGAAGGGGTTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCATCTTCTTTGCGCAAGAAATCTGACCTAACTCTTGTGTCTAAGGTTTGCTCTGGCCATGTAAGGAATGTGTTGGTGAATTTGCAAGAGGTTATTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCCCTAGCCATTGTTGCTGAAGGCTATGGCTTTGGAAGATCTTGGGTTTTTGTGTTGAGTTTACTTGGGCTCACACCACTTGCGGAACGAGTCAGCTTCTTGACAGAACAAGTTGCTTTTTACACTGGTCCTGCAGTGGGAGCACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCCATAACAAAATTGCTTTGGTCAAATATTCTCTCTTGGGTTCCATAATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCATTGGTGGCCTAGCAAATCTTAGTCAGGAACAAAAATACGACAGAAAACAAGCAGATATGAACTTGCTTATGTTGTTTGTGGCATTGCTTTGCCACTTGCTGCCATTGTTGTTTCATTATGTTGGTGCCTCAGCAGCTGACACTGGAGACTCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTGTTATGGTGATTGCATATTGTGCTTACCTTGTCTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCCCAGAATGAAGATGATGAAGAGGGTGGCAGTGATTCAGAAGCAGTGATAGGATTCTGGAGTGGGTTTACTTGGCTGGTTGGGATGACTATGACCATTGCTTTGTTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCTGATTCATGGGGTTTGTCTGTTAGCTTCCTTAGCATAATCTTGCTTCCAATTTTTGGCAATGCAACTGAACATGCAGCAGCAATCATATTTGGTTTCAAGAACAAACTGGACATCTCTTTGGGTGTTTCTTTGGGTTCTTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTATGGGTATCAAAATGGACCTCAACTTCAACCTCCTAGAAACAGCTTCTCTTTCTTTGGCAATAACAATCACAGCCTTCGCATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCATACTCTGCTATATTGTTATTGGGGCATGCTTTTTCGTACAAAGAACACCCCCTAACCAAACTAATGTTTCTAACATAACGCTTAAATCCGCAAACTGA 1341 0.4258 MASRNHEVSMLKENGGGGNNLKGLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVCSGHVRNVLVNLQEVILGTKLSILFPAIPLAIVAEGYGFGRSWVFVLSLLGLTPLAERVSFLTEQVAFYTGPAVGALLNATCGNATELIIAIFALSHNKIALVKYSLLGSIISNLLLVLGTSLFIGGLANLSQEQKYDRKQADMNLLMLFVALLCHLLPLLFHYVGASAADTGDSSLQLSRAASIVMVIAYCAYLVFQLWTHRQLFEAQNEDDEEGGSDSEAVIGFWSGFTWLVGMTMTIALLSEYVVQTIEDASDSWGLSVSFLSIILLPIFGNATEHAAAIIFGFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWIMGIKMDLNFNLLETASLSLAITITAFALQDGTSHYMKGLVLILCYIVIGACFFVQRTPPNQTNVSNITLKSAN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00467 446 Gene3D - 126 426 IPR044880 -
Gma03g00467 446 MobiDBLite consensus disorder prediction 1 20 - -
Gma03g00467 446 Pfam Sodium/calcium exchanger protein 284 421 IPR004837 GO:0016021|GO:0055085
Gma03g00467 446 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Gma03g00467 446 TIGRFAM caca2: calcium/proton exchanger 61 426 - -
Gma03g00467 446 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 439 - -
Gma03g00467 446 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 439 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma03g00467 446 TIGRFAM cax: calcium/proton exchanger 80 426 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00467 Gma-Chr3 8333226 8337310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00467 1 434 Antiporters AT2G38170 66.970 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00467 K07300 - gmx:100782052 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01844 18 51028488 51032123 Gma03g00467 03 8333226 8337310 PCT
Gma07g01383 07 18311696 18315991 Gma03g00467 03 8333226 8337310 PCT
Gma03g00467 03 8333226 8337310 Gma18g01844 18 51028488 51032123 PCT
Gma03g00467 03 8333226 8337310 Gma07g01383 07 18311696 18315991 PCT