Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00462 ATGTCTTTGACTCTTTGTAGATACATAGATGCAAAAAGCAACACATTCTTGCCAAAAGATGCTTCCACAGCTATTAACTCAGAGGGCTTTGTTCTCCTTGATATTAGGCCAACTTGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTGCACGTGCCAATGTTTGTGGAGGACACTGATAACAGTCCAATAACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGGTTGTGGACTGGCCAGTACCTCACTACTTTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATTCCATTCCTACAGGTAAGGAGACCAAGCTTCTTGTGGCGTGTGGAGGAGGATTAAGGTCAATGGCAGCAGCTTCAAAACTATACAATGGAGGTTACAAAAATCTTGGATGGTTGGCTGGAGGCTTTAATCGTTCAAAGAACAATGACTTCCCAACAGTAGAAGGAAAAGAAAAGTTGCAGCATGCAACTGTAGGGGGTGCTTCTTATTTCTAA 504 0.4345 MSLTLCRYIDAKSNTFLPKDASTAINSEGFVLLDIRPTWEREKARVAGSLHVPMFVEDTDNSPITLLKKWVHFGYIGLWTGQYLTTLNSEFLSQVENSIPTGKETKLLVACGGGLRSMAAASKLYNGGYKNLGWLAGGFNRSKNNDFPTVEGKEKLQHATVGGASYF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00462 167 ProSiteProfiles Rhodanese domain profile. 26 151 IPR001763 -
Gma03g00462 167 SMART rhod_4 16 148 IPR001763 -
Gma03g00462 167 Pfam Rhodanese-like domain 18 141 IPR001763 -
Gma03g00462 167 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 13 167 IPR044614 -
Gma03g00462 167 Gene3D - 13 160 IPR036873 -
Gma03g00462 167 CDD RHOD 20 140 - -
Gma03g00462 167 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 18 154 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00462 Gma-Chr3 8260720 8269404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00462 9 167 Sulfurtransferasese or Rhodanese AT3G08920 60.377 7.12e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00462 - - gmx:100780425 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00462 03 8260720 8269404 Gma03g00462 03 8260720 8269404 ECH