Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00458 ATGGGTGTGGACTATTACAAACTTCTTCAGGTGGATCGTAATGCCAGTGATGAGGATCTCAAGAAAGCCTATCGCAAGCTTGCTATGAAGTGGCACCCTGATAAGAACCCTAACAACAAAAGagacgctgaagccaaattcaagcaaatctcagaagcctatgatGTTTTGAGTGATCCGCAAAAGAGGGGTGTGTATGATCAGTATGGTGAGGAGGGACTGAAAGGGCAGGTGCCACCCCCAGGTGCTGGTGGTTTTTCCGGTGGCAGTGATGGCGGACCGACGATGTTCCGGTTCAACCCGAGAAGTGCAGATGATATATTCTCGGAGTTTTTTGGGTTTTCAAGTCCCTATGGAATGGGGGATATGGGTGGCCGTGCTGGCCCATCTGGCTATCCCAGATTTGCGGATGACCTTTTTGCTTCTTTTAGTAGGAGTGCGGCTGGAGAAGGCTCCAGCAATGTGCCAAGGAAAGGTGCGCCAATTGAGAAAACATTGCAATGCAGTTTGGAGGATTTGTACAAAGGGACTACCAAAAAAATGAAGATTTCCAGGGATGTGATTGATTCCAGTGGGAGGCCCACCACTGTAGAGGAAATTCTAACCATTGAGATCAAGCCGGGCTGGAAGAAAGGAACAAAAATAACTTTTCCTGAGAAGGGAAATGAACAAAGAGGAGTTATACCATCTGATCTTGTTTTTATCATTGATGAGAAACCTCATGGTGTCTTCAAAAGGGATGGCAATGATCTTGTTATCACACAGAAGATATCTCTAGTTGAAGCTCTGACCGGTTACACAGCACAACTGACGACACTTGATGGGAGGAATCTTACAGTCTCCACCAATTCCATCATCAGTCCGACGTACGAAGAAGTTATTAAAGGAGAGGGTATGCCAATTCCCAAGGAACCTTCCAAAAAGGGAAACTTGAGGATCAAGTTCAATATCAAGTTCCCCTCTAGACTCACATCAGAGCAGAAAACCGGCATTAAACGATTATTGACATCATAA 1014 0.4359 MGVDYYKLLQVDRNASDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVLSDPQKRGVYDQYGEEGLKGQVPPPGAGGFSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPYGMGDMGGRAGPSGYPRFADDLFASFSRSAAGEGSSNVPRKGAPIEKTLQCSLEDLYKGTTKKMKISRDVIDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFIIDEKPHGVFKRDGNDLVITQKISLVEALTGYTAQLTTLDGRNLTVSTNSIISPTYEEVIKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKTGIKRLLTS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00458 337 Pfam DnaJ domain 4 67 IPR001623 -
Gma03g00458 337 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma03g00458 337 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma03g00458 337 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma03g00458 337 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gma03g00458 337 SMART dnaj_3 3 62 IPR001623 -
Gma03g00458 337 CDD DnaJ 4 59 IPR001623 -
Gma03g00458 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Gma03g00458 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Gma03g00458 337 CDD DnaJ_C 160 323 - -
Gma03g00458 337 Gene3D DnaJ domain 3 123 IPR036869 -
Gma03g00458 337 Gene3D - 241 321 - -
Gma03g00458 337 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gma03g00458 337 MobiDBLite consensus disorder prediction 73 96 - -
Gma03g00458 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 241 IPR008971 GO:0006457|GO:0051082
Gma03g00458 337 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Gma03g00458 337 Gene3D - 161 239 - -
Gma03g00458 337 PANTHER BNAANNG28460D PROTEIN 1 337 - -
Gma03g00458 337 SUPERFAMILY Chaperone J-domain 3 97 IPR036869 -
Gma03g00458 337 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00458 Gma-Chr3 8131917 8136838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00458 4 67 Miscellaneous Gene Families AT5G49580 48.485 1.81e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00458 K09510 - gmx:100777607 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00458 03 8131917 8136838 Gma03g00458 03 8131917 8136838 ECH
Gma18g01852 18 51171123 51176160 Gma03g00458 03 8131917 8136838 PCT
Gma07g01391 07 18481452 18485855 Gma03g00458 03 8131917 8136838 PCT
Gma03g00458 03 8131917 8136838 Gma18g01852 18 51171123 51176160 PCT
Gma03g00458 03 8131917 8136838 Gma07g01391 07 18481452 18485855 PCT