Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00444 ATGGCCAAGCCACAGAAACCACAACCAAAACCGGGGTGTTTCTCTTTCTCCAGCTTCCTACGTGTGCTTCTATGTGCTGGAAATGGAACTAGTCCACCAGTGCACCCTTATCACATCACAGAATCAGATGAATCAAAAAATGCACATTTCACCAAAGAAAAAATGGTGGTGAATGATAATGGTAATGATGATATTTCTGCCCCTGGAGTTGTGGCAAGGCTAATGGGTTTGGATTCACTTCCGAACCCCAAATGGGTGGTGAAATGTGGTAGTGGCAGCATCCCAGATTCTGTTCCTAGAAGCAGGTCAGTGAACTTCGTTGACTACTTGCTTGAGTTTGATGCTAGCCATGTTAGTAGCCATAGGAGGGTGAAGACTTCAACATCGTTCAGAGAGGTTCCTAGTTTGGTTCAGAACCAAAAGGGTAACAATGGTAATAATCTCTTTGTGTTTTGCATGGATGGTGATGGTAACATGAGGGAAGAGAAAGAGGGTAGAAATGAGATGAGGGAAGTGGAAGAGTTGAGGCAGAGGAAGAGGCAGGGGAGTAATAAGAACAAAGAGAGTGTGAGTGTGAAGAAAGAGAAAAATCAAGGGAAGAAGAACAAGAAGATTTCCAAGCTGAAGAATGAACCAAGGAGGGTACCTTCTTCTAAGAATGGTTCAAAGGGTCGAACTCGAAACCATCATGGTGAGGTTAAAGATTTGTCATCTGTGTCCTCAAACTCCTCTAAGTGTAGTAGTTCTTGTAGTAGTAGTAGAAAAAATGGTGTTAGTTCAAGATCAAGGTTCAACACTTCTTTGTCAAATGCACACAAGAAGGGGGTTGTGGAACCAAAATTCAGGAAGAACATGAGAAATCAGAATCCAGTGTTGAAGGAAGAAAGTGAATGCAGGTTGGAAAATCACAGTCCAGTTTCAGTTGTAGAGAGCAATGACTACTATCCTTTCCTTTATGGAACTGATTTTCAAGATGGTCCAAGCTCCGTTGCTTCAAAGTCAAAAAAGTGGGGATCTCCATCACTTTTGTCATTGGGTGAAGAAGTTGAAGACAGTGCAAGTACTAATGAAGGTTATACCTTCATTGATGTCAACAAGGAAGCAGAGTATTACTCAGAATTGATGTTGAAGCTTCGTACTTTGACTGAACAGGATATAAGAGAATCAGATTGTACCTCAAAACGTGTACGCGAGACTGAAAACTTTGGGGATATTTGTTTGATGTTTGAGCATAAAATTTTCGACCATTTATTATATGAAGTTGTCAATGAAGTTTTAGAACTTTATTATTGA 1293 0.4068 MAKPQKPQPKPGCFSFSSFLRVLLCAGNGTSPPVHPYHITESDESKNAHFTKEKMVVNDNGNDDISAPGVVARLMGLDSLPNPKWVVKCGSGSIPDSVPRSRSVNFVDYLLEFDASHVSSHRRVKTSTSFREVPSLVQNQKGNNGNNLFVFCMDGDGNMREEKEGRNEMREVEELRQRKRQGSNKNKESVSVKKEKNQGKKNKKISKLKNEPRRVPSSKNGSKGRTRNHHGEVKDLSSVSSNSSKCSSSCSSSRKNGVSSRSRFNTSLSNAHKKGVVEPKFRKNMRNQNPVLKEESECRLENHSPVSVVESNDYYPFLYGTDFQDGPSSVASKSKKWGSPSLLSLGEEVEDSASTNEGYTFIDVNKEAEYYSELMLKLRTLTEQDIRESDCTSKRVRETENFGDICLMFEHKIFDHLLYEVVNEVLELYY 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00444 430 MobiDBLite consensus disorder prediction 235 272 - -
Gma03g00444 430 Coils Coil 158 178 - -
Gma03g00444 430 MobiDBLite consensus disorder prediction 160 277 - -
Gma03g00444 430 Pfam DUF761-associated sequence motif 65 82 IPR032795 -
Gma03g00444 430 PANTHER OS05G0128300 PROTEIN 1 429 - -
Gma03g00444 430 MobiDBLite consensus disorder prediction 160 196 - -
Gma03g00444 430 PANTHER ALC-INTERACTING PROTEIN 1 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00444 Gma-Chr3 7834126 7836256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00444 5 425 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.085 4.44e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00444 - - gmx:102668583 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00444 03 7834126 7836256 Gma03g00444 03 7834126 7836256 ECH