Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00426 ATGAGTATCATAGTTTATATACTGTTTTCCCCTTCTCTCATAGTTTTCATAGCAGCAGAAACTTCATCCATTACACTATCCCAGTCCCTCAGTTACGGAAAAACCCTAGTTTCCCCAAGTGGAATCTTTGAACTCGGTTTCTGCAATCTTGGAAATCCGAACAAAATCTACCTTGGGATTTGGTACAAGAATATTCCACTTCAAAACATAGTTTGGGTTGCAAACGGTGGCAACCCAATCAAGGATTCTTTTTCCATCTTGAAACTAGACAGTTCTGGCAATTTGGTCCTTACACACAACAACACGATTGTTTGGAGCACAAGTTCTCCAGAAAAGGCACAGAATCCGGTGGCAGAGCTCTTGGATTCAGGCAATCTTGTGATAAGAGATGAGAATGAAGCCAAGGAAGATACATATCTGTGGCAAAGCTTTGATTACCCATCTAATACAATGCTGTCAGGAATGAAGGTTGGATGGGACATCAAGAGAAATCTTAGTACTTGCCTGATAGCTTGGAAGAGTGATAATGATCCAACCCAAGGAGACTTATCATGGGGTATTACCCTGCACCCCTATCCTGATATCTATATGATGAAAGGAACAAAAATGTACCATAGATTTGGACCATGGAATGGTTTGCGTTTCAGTGGCATGCCACTTATGAAGCCTAATAACCCCATATACCATTACGAGTTTGTCTCCAACCAAGAAGTGGTTTATTACAGATGGAGTGTCAAACAGACTAGTTCAATATCTAAAGTGGTACTTAACCAAACCACACTAGAACGTCAGCGTTATGTATGGTCAGGAAAATCATGGATTTTATATGAAGTGATGCCAGAAGACAACTGTGACCATTATGGAGTCTGTGGAGCCAATACATATTGCACCACTTCTGCGTTACCAATGTGTCAATGTTTAAAAGGGTTCAAGCCTAAGACTCCTGAGAAATGGAACTCAATGGACTGGTCTGAAGGATGTATCAGGAAACATCCACTTAGCCGCCAAGATAAGCTCAATGATGGGTTTGTACTTGTGGATGGCTTGAAAGTGCCGGATACTAAAGATACGTTTGTGAATGAGACTATTGATCTAAAACAATGCAGAACCAAGTGCTTGAATAATTGTTCCTGCATGGCATATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTTATGTGGTTCGGTGATTTATTTGACATCAAACTGTATCCAGTTCCAGAGAATGGGCAGAGTCTATATATAAGGTTGCCTGCGTCAGAAATAGAGTCTATCAGGCACAAGAAGTCAAAAATAATATTTATAACCTCCGTTGCTGCAACTTTAGGAGTGGTGCTTGCTATTTATTTCGTCTACAAAAGGAACATTGCTGATAAGCCAAAGAAAAATGAGAACATTGAAAGACAGCTTGAAGATCTGGATGTGCCATTGTTTCATCTGCTAACAATCACTACTGCCACGAATAATTTCTCGTTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAAAATTAGTGGATGGGCGAGAAATTGCTGTCAAGAGACTTTCAAGTAGCTCTGGACAAGGAATAACCGAGTTCACAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAGGCTCCTTGGTTGTTGCTTTCGAGGACAAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACACCTTCATTTTTGATAAAGTAAAAAGTAAATTGCTGGATTGGCCACAGCGCTTCCACATAATATTTGGAATTGCTAGAGGGCTTTTGTATCTCCATCAAGATTCCCAATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGCAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCGTTTGGAGGAGACCAAATTGAAGGAAACACAAACAGGGTAGTTGGGACTTATGGATACATGGCCCCAGAATATGCTGTTGATGGACTATTTTCAATCAAATCGGACGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCTCTTTGTCATAGAAACCAGACCCTTAACCTGGTTGGTTATGCATGGACACTTTGGAAAGAGAAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACCTATGTGCTATCCCAGAAGCACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCGGAGGATAGGCCAACCATGACCTCAGTAATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAGCCTGGCTTCTTTCCCAGAAGGATTTCGGACGAAGAAAAATTCAGCTCAAATCTAAACCATAAGACTTCAAATGATGAGTTAACCATTACCTCATTAACTGGTCGGTGA 2430 0.3992 MSIIVYILFSPSLIVFIAAETSSITLSQSLSYGKTLVSPSGIFELGFCNLGNPNKIYLGIWYKNIPLQNIVWVANGGNPIKDSFSILKLDSSGNLVLTHNNTIVWSTSSPEKAQNPVAELLDSGNLVIRDENEAKEDTYLWQSFDYPSNTMLSGMKVGWDIKRNLSTCLIAWKSDNDPTQGDLSWGITLHPYPDIYMMKGTKMYHRFGPWNGLRFSGMPLMKPNNPIYHYEFVSNQEVVYYRWSVKQTSSISKVVLNQTTLERQRYVWSGKSWILYEVMPEDNCDHYGVCGANTYCTTSALPMCQCLKGFKPKTPEKWNSMDWSEGCIRKHPLSRQDKLNDGFVLVDGLKVPDTKDTFVNETIDLKQCRTKCLNNCSCMAYTNSNISGAGSGCVMWFGDLFDIKLYPVPENGQSLYIRLPASEIESIRHKKSKIIFITSVAATLGVVLAIYFVYKRNIADKPKKNENIERQLEDLDVPLFHLLTITTATNNFSLNNKIGQGGFGPVYKGKLVDGREIAVKRLSSSSGQGITEFTTEVKLIAKLQHRNLVRLLGCCFRGQEKLLVYEYMVNGSLDTFIFDKVKSKLLDWPQRFHIIFGIARGLLYLHQDSQLRIIHRDLKASNVLLDAKLNPKISDFGMARAFGGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHRNQTLNLVGYAWTLWKEKNALQLIDSSIKDLCAIPEALRCIHVSLLCLQQYPEDRPTMTSVIQMLGSEMELVEPKEPGFFPRRISDEEKFSSNLNHKTSNDELTITSLTGR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00426 809 Pfam Protein tyrosine and serine/threonine kinase 493 763 IPR001245 GO:0004672|GO:0006468
Gma03g00426 809 CDD STKc_IRAK 498 763 - -
Gma03g00426 809 ProSiteProfiles PAN/Apple domain profile. 327 420 IPR003609 -
Gma03g00426 809 SUPERFAMILY Protein kinase-like (PK-like) 472 763 IPR011009 -
Gma03g00426 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 178 IPR036426 -
Gma03g00426 809 SMART serkin_6 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00426 809 Pfam D-mannose binding lectin 70 173 IPR001480 -
Gma03g00426 809 Pfam PAN-like domain 339 403 IPR003609 -
Gma03g00426 809 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00426 809 SMART ntp_6 338 419 IPR003609 -
Gma03g00426 809 CDD B_lectin 27 147 IPR001480 -
Gma03g00426 809 Gene3D Transferase(Phosphotransferase) domain 1 568 773 - -
Gma03g00426 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Gma03g00426 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 808 - -
Gma03g00426 809 Pfam S-locus glycoprotein domain 206 313 IPR000858 GO:0048544
Gma03g00426 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Gma03g00426 809 Gene3D Phosphorylase Kinase; domain 1 453 567 - -
Gma03g00426 809 CDD PAN_AP_plant 331 420 - -
Gma03g00426 809 SMART blect_4 27 147 IPR001480 -
Gma03g00426 809 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Gma03g00426 809 Gene3D - 14 144 IPR036426 -
Gma03g00426 809 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00426 Gma-Chr3 7514518 7518847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00426 435 780 Receptor kinase-like Gene Family AT4G23190 51.714 3.73e-119 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma03g00426 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00426 - - gmx:100808227 1651.34