Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00425 ATGAAGTTTATTCTTTTTCTGATGAGTATCATAGTTTATATACTGTTTTTCTCATCTCTCATAGTTTTCACATCAGGAGAAACTTCATCCATCACACAATCCCAGTCCCTCAGTTACGGAAAGACCCTAGTTTCCCCAAGTGGAATCTTCGAACTCGGTTTCTTCAATCTTGGAAATCCGAACAAAATCTACCTTGGGATTTGGTACAAGAATATTCCACTTCAGAACATGGTTTGGGTTGCAAACAGTAGCATCCCAATAAAGGATTCTTCTCCAATTTTGAAGCTAGACAGTTCTGGCAATTTGGTCCTTACACACAACAACACTATTGTTTGGAGCACAAGTTCTCCAGAAAGGGTGTGGAATCCGGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGATGAGAATGGAGCAAAGGAAGATGCATATCTGTGGCAAAGTTTTGATTACCCTTCTAATACTATGCTGCCAGGAATGAAGATTGGATGGGACCTCAAAAGAAATCTTAGTACTTGCCTGGTAGCTTGGAAGAGTGATGATGATCCAACCCAAGGAGACTTATCTTTAGGCATTACCCTGCACCCTTATCCTGAGGTCTATATGATGAATGGAACAAAAAAGTACCATAGACTTGGACCATGGAATGGCTTGCGTTTCAGTGGCATGCCACTTATGAAGCCTAATAACCCCATTTACCATTACGAGTTTGTCTCCAACCAGGAAGAGGTTTATTACAGATGGAGCCTAAAGCAGACTGGTTCAATATCAAAAGTGGTACTTAACCAAGCCACACTAGAACGTCGTCTTTATGTATGGTCAGGGAAATCATGGATTTTATATTCAACGATGCCACAAGACAACTGTGACCATTATGGATTTTGTGGAGCCAATACATATTGCACCACTTCTGTATTACCAATGTGTCAATGTTTAAATGGGTTCAAGCCTAAGTCTCCTGAGGAATGGAACTCAATGGACTGGTCTGAAGGATGTGTCCAGAAACATCCACTTAGCTGCCGAGATAAGCTCAGTGATGGGTTTGTACCTGTGGATGGCTTGAAAGTGCCGGATACTAAAGATACATTTGTGGATGAGACCATTGATCTAAAACAATGCAGAACCAAGTGCTTGAATAATTGTTCCTGCATGGCATATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTTATGTGGTTTGGTGATTTATTTGACATCAAACTGTATCCAGTTCCAGAGAATGGGCAGAGTCTATATATAAGGTTGCCTGCGTCAGAATTAGAGTCTATCAGGCACAAGAGGAACTCTAAAATAATAATTGTAACCTCCGTTGCTGCAACTTTAGTAGTGACGCTTGCTATTTATTTCGTCTGCAGAAGGAAATTTGCCGATAAGTCAAAGACAAAAGAGAACATTGAAAGTCACATAGATGACATGGATGTGCCATTGTTTGATCTGCTAACTATCATTACTGCCACCAACAATTTTTCGTTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAGAATTAGTGGATAGGCGACAAATTGCTGTCAAGAGACTATCAACTAGCTCTGGACAAGGAATAAATGAGTTCACAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTTGGCTGTTGCTTTCAAGAACAAGAAAAATTACTAATATATGAATACATGGTTAATGGCAGCCTAGACACCTTCATTTTTGATCAAGTGAAAGGTAAATTACTGGATTGGCCCCGGCGCTTCCACGTAATATTTGGAATTGCTAGAGGACTTTTGTATCTCCATCAAGATTCCCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAATTTAAATCCAAAAATATCAGATTTTGGAACGGCAAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAAAAGAGTAGTTGGGACTTATGGATACATGGCCCCAGAATATGCTGTTGCTGGACTATTTTCAATCAAATCGGACGTTTTCAGCTTTGGCATTTTATTGTTGGAGATTGTATGTGGGATAAAAAATAAAGCTCTTTGTGATGGAAACCAGACTAATAGCCTTGTTGGTTATGCATGGACACTTTGGAAAGAGAAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACTCGTGTGTTATCCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCTGGGGATAGACCAACCATGACATCAGTAATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAGCTTGCTGAAAATATTGCACTGACGCACAATTTGATTGCAAGTTCTTAA 2394 0.3981 MKFILFLMSIIVYILFFSSLIVFTSGETSSITQSQSLSYGKTLVSPSGIFELGFFNLGNPNKIYLGIWYKNIPLQNMVWVANSSIPIKDSSPILKLDSSGNLVLTHNNTIVWSTSSPERVWNPVAELLDSGNLVIRDENGAKEDAYLWQSFDYPSNTMLPGMKIGWDLKRNLSTCLVAWKSDDDPTQGDLSLGITLHPYPEVYMMNGTKKYHRLGPWNGLRFSGMPLMKPNNPIYHYEFVSNQEEVYYRWSLKQTGSISKVVLNQATLERRLYVWSGKSWILYSTMPQDNCDHYGFCGANTYCTTSVLPMCQCLNGFKPKSPEEWNSMDWSEGCVQKHPLSCRDKLSDGFVPVDGLKVPDTKDTFVDETIDLKQCRTKCLNNCSCMAYTNSNISGAGSGCVMWFGDLFDIKLYPVPENGQSLYIRLPASELESIRHKRNSKIIIVTSVAATLVVTLAIYFVCRRKFADKSKTKENIESHIDDMDVPLFDLLTIITATNNFSLNNKIGQGGFGPVYKGELVDRRQIAVKRLSTSSGQGINEFTTEVKLIAKLQHRNLVKLLGCCFQEQEKLLIYEYMVNGSLDTFIFDQVKGKLLDWPRRFHVIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGTARAFGGDQTEGNTKRVVGTYGYMAPEYAVAGLFSIKSDVFSFGILLLEIVCGIKNKALCDGNQTNSLVGYAWTLWKEKNALQLIDSSIKDSCVIPEVLRCIHVSLLCLQQYPGDRPTMTSVIQMLGSEMELVEPKELAENIALTHNLIASS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00425 797 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Gma03g00425 797 SMART serkin_6 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00425 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Gma03g00425 797 Gene3D Transferase(Phosphotransferase) domain 1 576 788 - -
Gma03g00425 797 Pfam PAN-like domain 344 410 IPR003609 -
Gma03g00425 797 Gene3D - 22 151 IPR036426 -
Gma03g00425 797 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 787 - -
Gma03g00425 797 ProSiteProfiles PAN/Apple domain profile. 342 427 IPR003609 -
Gma03g00425 797 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Gma03g00425 797 Pfam Protein tyrosine and serine/threonine kinase 501 771 IPR001245 GO:0004672|GO:0006468
Gma03g00425 797 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gma03g00425 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 787 - -
Gma03g00425 797 SMART blect_4 34 154 IPR001480 -
Gma03g00425 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Gma03g00425 797 SUPERFAMILY Protein kinase-like (PK-like) 476 771 IPR011009 -
Gma03g00425 797 PIRSF SRK 1 795 IPR024171 GO:0004674
Gma03g00425 797 CDD B_lectin 34 154 IPR001480 -
Gma03g00425 797 CDD STKc_IRAK 506 771 - -
Gma03g00425 797 SMART ntp_6 345 426 IPR003609 -
Gma03g00425 797 CDD PAN_AP_plant 338 427 - -
Gma03g00425 797 Pfam D-mannose binding lectin 77 180 IPR001480 -
Gma03g00425 797 ProSiteProfiles Protein kinase domain profile. 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00425 Gma-Chr3 7451163 7455137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00425 439 773 Receptor kinase-like Gene Family AT4G23230 53.392 5.45e-116 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma03g00425 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00425 - - gmx:100807167 1581.62