Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00424 ATGCACACGATGGACGTGGAAGAAGCTTCTGCACCCAAAGAGGGAAAGCCCGTTTTGGTGATCTTGGCGGGAGCACCTGGGAGTGGGAAGTCCACCTTCTGCGAAGAAGTAATACGCGTCTCTACTCGCCCCTGGGTCCGCATTTGCCAGGAAACTGTTGGAAATGGTAAAGCAGGAAATAAAGCTCATTGCCTCAGCAGTGCAACTGGAGCATTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTGACAGAGAACAGCGTTCAGAATTTATAAAGCTTGGTGTCAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAGCTTCCCAAATTAAGTGAAGGTTTTAGCCGGATAACATTTTGTCAGAATGAGAGTGATGTCAAAAATGCTCTTAATACATACAGCACACTTGGGCCACTGGATAGTCTTCCACATGGCTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAACTTGGTATAATGATGTTCCTAAAAAAAGCAGAGGTCTCAGTTGCTGCTGCATCTAGAGAGAGTGGCATTGAAGACCCTACTTCCCAGACTCTGGGTAAAAATATTTCCTGCTGCAAAGACAAGGAAACACTTTCCTCAATTCCTGATAATGCCAACTCAGAGATGAAGGAAGTAGAAAGCCAAGCAGTTGGCTCTGCTGGTTCCCATGCCAATCAAGTTTCTCCGGATGATATTCCCACTCTGGTATTTCCATCTATTTCAACATCTGATTTCCAATTCAACCATGAGAAGGCAGCTGATATCATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGTTTAGGAATGCTAGACTTGTTCTCATTGACTTTTCTCATAAATCAAAGATTTTGTCCTTAGTTAAGGCTAAAGTTGCGGGAAAAAACATTGACACCCAAAAGTTCTTTACCCATGTTGGGGACATTACGCATCTTTACTCCAGGGGAGGTTTGCGATGTGATGTCATTGCTAACGCTGCCAACTGGCGGTTAAATCCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAGTGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTACAATCTCTTTCTCCTGGGAATGCTGCGGTTGCCCCTCTACCTTCATCTTCTCCTTTGTTCACTAGAGAATGTGTAACCCATGTAATACATGTTGTTGGACCTAATATGAACCCACAAAGACCAAATTGTCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGCTTTGCATCTATTGTGACAAACCTGACATGGCAACCAGTTGGAAAAACTGAAAACCTTGAAAGGAAGTCTTTAATGTTGCAGGTTCAGTCTAATTGTTCCAGAAATTATTTCACAAAAATAGATCAAAAGAGTAAAAGAGATGTTGATCATGGATCAGCAAAAAGCAAGAAATACAAGGGGACTCAGGATGGTTCTGGATTGACCTTTACTGATTCTAGGGATGAAAATGTTGATTCAGAGCATAGAAGAACTGAGAGGAGCATGAGTAAGGCATGGGGATCATGGGCTCAAGCTCTTCACCAAATAGTTATGCATCCAGAAAAGCATAAGGATGACTTGCTTGAAATTTCCGATGATGCTGTTGTATTGAATGATATGTATCCCAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAACTGTGGGTCTTGATTGCCTGGCAGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGAATGAGAATGCTGCTCTGGTGTTTCGTCTTGGATATCACATGGAACCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTCCAATCAACACATTTAAAGAACAAGAAGCACTGGAACTCATTTAACACGGCTTTCTTTCATGACTCAGTAGATGTAATGGATGAGATCTCTAGTGATGGGAAGGCAACATTGAAAGATGATGACAAACTACTGTCTATGGAGTTGAGGTGCCCAGATGTAGAAGTGCACCTCCAAACATACTGCGCTTAA 2124 0.4204 MHTMDVEEASAPKEGKPVLVILAGAPGSGKSTFCEEVIRVSTRPWVRICQETVGNGKAGNKAHCLSSATGALKDGKSVFIDRCNLDREQRSEFIKLGVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFSRITFCQNESDVKNALNTYSTLGPLDSLPHGCFGQKNPDSKIQLGIMMFLKKAEVSVAAASRESGIEDPTSQTLGKNISCCKDKETLSSIPDNANSEMKEVESQAVGSAGSHANQVSPDDIPTLVFPSISTSDFQFNHEKAADIIVEKVAEFSNKFRNARLVLIDFSHKSKILSLVKAKVAGKNIDTQKFFTHVGDITHLYSRGGLRCDVIANAANWRLNPGGGGVNAAIFSAAGPELESATKEKVQSLSPGNAAVAPLPSSSPLFTRECVTHVIHVVGPNMNPQRPNCLNNDYNKGCKILQDAYTSLFEGFASIVTNLTWQPVGKTENLERKSLMLQVQSNCSRNYFTKIDQKSKRDVDHGSAKSKKYKGTQDGSGLTFTDSRDENVDSEHRRTERSMSKAWGSWAQALHQIVMHPEKHKDDLLEISDDAVVLNDMYPKAQKHVLVLARTVGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENAALVFRLGYHMEPSMRQLHLHVISQDFQSTHLKNKKHWNSFNTAFFHDSVDVMDEISSDGKATLKDDDKLLSMELRCPDVEVHLQTYCA 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00424 707 Pfam Macro domain 344 419 IPR002589 -
Gma03g00424 707 ProSiteProfiles Macro domain profile. 309 487 IPR002589 -
Gma03g00424 707 Gene3D Leucine Aminopeptidase, subunit E, domain 1 213 313 IPR043472 -
Gma03g00424 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 137 IPR027417 -
Gma03g00424 707 SUPERFAMILY Macro domain-like 247 297 IPR043472 -
Gma03g00424 707 SMART YBR022w_8 321 463 IPR002589 -
Gma03g00424 707 SUPERFAMILY HIT-like 526 685 IPR036265 -
Gma03g00424 707 MobiDBLite consensus disorder prediction 486 500 - -
Gma03g00424 707 MobiDBLite consensus disorder prediction 486 527 - -
Gma03g00424 707 Pfam Zeta toxin 11 48 IPR010488 GO:0005524|GO:0016301
Gma03g00424 707 Gene3D - 537 705 IPR036265 -
Gma03g00424 707 MobiDBLite consensus disorder prediction 501 515 - -
Gma03g00424 707 Gene3D Leucine Aminopeptidase, subunit E, domain 1 314 452 IPR043472 -
Gma03g00424 707 Pfam Scavenger mRNA decapping enzyme C-term binding 543 655 - -
Gma03g00424 707 PANTHER APRATAXIN 16 695 IPR026963 GO:0003677|GO:0006281|GO:0033699
Gma03g00424 707 PANTHER APRATAXIN-RELATED 16 695 - -
Gma03g00424 707 Gene3D - 2 153 IPR027417 -
Gma03g00424 707 SUPERFAMILY Macro domain-like 304 442 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00424 Gma-Chr3 7432733 7441799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00424 14 695 C2H2 Transcription Factor Family AT5G01310 55.682 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00424 K10863 - gmx:100786762 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00424 03 7432733 7441799 Gma03g00424 03 7432733 7441799 ECH