Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00420 ATGGATCTAGATGCATTCACTGCCAGCCTATTCAAGTGGGACCCATGCACCGTCCTCCCGCCCACGGCACCCCCGCGACCTCCTCTCCTCAAATACGCAATCGCTCCGTCGCTAGTGACCCTAGCGTTCCATCCCGCGAGGGCGGCAGCGCCGCGCGAGCTCAGAGGACTGGAGGAGCTCTTTCAAGCTTACGAGATCTGCTACTACACGGCGGCGAAGATCGCTGAGCTCGGGTTCACGGTGAGCACGCTGGTGGACATGAAGGACGAGGAGCTCGATGACATGATGAACAATCTCTCCTAG 303 0.5974 MDLDAFTASLFKWDPCTVLPPTAPPRPPLLKYAIAPSLVTLAFHPARAAAPRELRGLEELFQAYEICYYTAAKIAELGFTVSTLVDMKDEELDDMMNNLS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00420 100 PANTHER PROTEIN LEAFY 1 100 - -
Gma03g00420 100 Pfam Floricaula / Leafy protein SAM domain 53 100 IPR035079 -
Gma03g00420 100 PANTHER PROTEIN LEAFY 1 100 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00420 Gma-Chr3 7362093 7362395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00420 1 100 Orphan Transcription Factor Family AT5G61850 49.000 7.01e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Gma03g00420 SAM_LFY 2.8e-21 CL0003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00420 - - gsj:114416001 158.688