Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00418 ATGTCTTCTTTCCTGTTACGCTTTCCGCCTGAACGGTATCAAGAGGACAACAgaaactatgacgtgtttttgagtttcagaggggacgacacgcgtgcttctttcacttcacatctctataccgctcttcacaacgcgggaatctctgttttcaaggatgatgagacacttccaaggggaaataaaatttcaacctcgctggggttagcaattgaagagtctcgcctttatgttgttgttttctctaaaaactatgcaggttcgctatggtgtttgcaagagttggagaaaataatggagtgtcacaaagcaacaggacaagtggtagtgccagtgttctatgatatagatccctctgaagtacgtcatcaaacaggccactttggacaagcatttcgaaaCCTTGAGGCGTATATGAATTTAAAAATGGAAGAGGAAATGCTGCCAGGATGGCAAATGATGGTTCATGAGTGCCCTGGCATCTCAGGGCCTTCTGTTTTCCGAGATTGCAATGGTCAAAGTGAGATTTTGGAAAGGATACATCGCCTCGTGGAGGATTGGAGGGTGTCACTTCGTAAGATTGTTAGCATCTCCCCCGTTTCAGGATTCGGGAGAGGAATGTTGATTGCTGAACAGTTAATAGATCTCCTTGTGAAGCATTGGAGGACGACACTGAGAATAATGGAGATGTCTAGTAATATAGATCTGCTTTTGAAGCATTGGAGTGAGGCACTTTGGAAGGCTGCTGGCATCTCGGGGGGTGCAGACCTAATTTCCAATGAGATGACGGCACCTCTGGACCCTGCGATATACCTCCTCGTGGAGGATTGGAGGAAGGCACATCGTGCGGTTCGTGATATCTCAGAGGGTGTAGTCTTAAAATCCATTGTTGAAGAGGAGATCAGAAAAGATTTTGAGGTCCTTGTAATTCATTGGAAGGAAGCACTTCATGAGGCTGCTGGCATCTCGAGGTTTGTAGTCCTAAATCCAACcctggggaaggaaatcggttgtatggcttgcacctcgcgtcgcaattttggtgcgagaccagaaatgaaacagctgagaaggaatgatggaggtaaaccaaccacaggatttgcgagatgttcaaactcattaaagtacttgttgacaaaacccttcttagtgaGTATTGACAAATGTTGGGCAAAAAAGTTTTCAAAACAAAAAAATAAAATCAGAATCAAACACACTCTAAGAACTATAATAGATTTATCACTTTGTCATATATATTTTATAGAAATGTTAGTAAGTACCACCATGCAATGGATGAACCTAATGGAGAACAGACGTTTATACAATTATAACTTTTTACTTAAATTTCTATTAAATTTTGATGCATATTTGGACACACCTTTTCTTTGTTTTTATTATGTTTTTAATTATAGGAATGAAAGTGAGGCTATCAAAACTATTGTTGAAAACGTTAAGCCTTTGTTAGACAAGACAGAGTTGTTTGTTGCTGATAATCCAGTCGGCGTAGAACCACGAGTCCAGGAAATGATTGAACTATTAGACCAAATACAatcaaacggtgttctactactcgggatgtgggggatgggaggcattggtaaaacaactattgcaaaagccatttacaacaagattggccgcaattttgaggtaaaaagcttcctcgcaagtattagggaagtttgggggcaagatgctggtcaagtatatctacaagaacaacttatatttgatatcggaaaagaaacaaacacaaagatacgtaatgttgactcaggaaaagttatgttaaaagaacgacttcgcaataaaagggtactccttatacttgatgatgtaaataatttgcatcaattgaatgttttgtgtggaagtcgtgaatggtttggttcagggagtagaataataatcacaactagagatatgcatatacttagagggagaagagttgacaaagtgttcagaatgaaaggaatggatgaagacgaatctattgagctttttagttggcatgcatttaagcaagcaagtccaagagaagattttattgaactttctagaaatgtagttgcttattctgcgggattgccactagctcttgaagtccttgggtcctatttgtttgatatggaggtaacagagtggaagaatgtattggagaaactcaagaaaattcctaatgatgaagtacaagagaaattaaaaataagctatgatggtttaactgatgatacagagaaaggaatatttcttgatatagcttgtttctttacaggaaaggaccggaatgatgttatacatatattaaatggttgtgggctttgtgcagaaaatggaatacgtgtcttggtagaaagaggccttgtaactgtagattataagaacaagcttggaatgcatgatttgctgcgagacatgggaagagaaatcattcgttcaaaaacaccaatggagcctgaggagcgtagtaggttatggtttcatgaagatgcgcttgatgtattatcaaaagaaactggaacaaaagctattgagggactggctttgaagttaccaagaactaatactaaatgtttgagcactaaagcttttaaggagatgaaaaaactcaggttgcttcaacttgctggtgtacaattggttggagatttcaagtatctttccaaagatcttagatggctttgttggcatggatttcctttagcatgcataccaacaaacctttatcaaggaagtctagtttccattgagctagaaaacagcaaTGTTAATCTTTTGTGGAAAGAAGCCCAGGTAATGgagaagctgaaaattcttaatctcagtcattctcattatttaacagagactccagacttttcaaatttgcctaatcttgaaaagctattactcgtagattgtccaaggttgtccgcgatttcctataccattgaacatctcaataaagttcttctaataaattttcaagattgtattagcctttgtaaccttccaagaagtatctataagttgaaatctcttaaagcactcattctttcaggatgtttaaagattgacaagttagaagaggatttggaacaaatggagtctttgacaacccttattgcggataagactgcaataacaagagtgccattttcaatagttagatcaaaaaGAATTGGATATATCTCTTTGTGCGGGTATGAAGGATTCTCACGTGATGTGTTTCCTTCAATCATTTGGTCTTGGATGTCACCAACAAATATTCTCTCATCCCGCGTTCAAACATTTCTAGATGTGTCATCTCTCGTTTCTTTAGACGTGCCAAATAGTAGTTCCAATCATCTATCATATATTTCCAAGGACCTTCCACTGCTTCAAAGTCTTTGTATAGAGTGTGGCTCAGAACTTCAACTTTCTCTAAATGCTGCAAATATTTTGGATGCTTTATATGCCACAAATTTTGAAGAATTGGAATCAACTGCAGCCACATCGCAAATGCATAATATGAATGTTTTAACATCAATTGAATGCAACAATCAAGTACACAACAAAGGATCAAAAAATTTCAGGAGATCACTTTTAATTCAAATGGGAACGAGTTGTCAGGTCACCAATATTCTGAAACAGAGAATTTTACAGAATACGGCTACTAGTGATGGTGGTGGTTGTTTACTCCCCGGTGATAGCTATCCAGATTGGTTAACCTTCAACAGCGAAGGTTCATCCGTGACATTTAAAATCCCTCAAGTGAAAGGGCGTAACTTGAAGAAAATGATGTGCCATGTCCATTATTCTTCCCCGGAAAATATAACTTCAGATGGTTTGAAAAATTTGTTGGTGATAAATCACTCAAAGGCCACCATCCAACTTTATAAGAGAAATGCATTAGTCTCCTTCGAAGATGATGAGTGGCACGGGGTACTATCAAAAATAGAGCCTGGAAACAAAGTGCAAATTGTTGTTGTCTTCTGGAGCAAATTAACTGTTTACAAGACAACAATTTATCTCATATATGAACCAATGAATCAAAAAATAgagcattcccatgcgccaaataagaatgtaatggattctagtggtgatgaaaatgaatgtgttgttgggaccatctcacttcaagtagaatccatatataagccaacaaatgacataatggagcattgccatgcatcaaataagaat 4170 0.1796 MSSFLLRFPPERYQEDNRNYDVFLSFRGDDTRASFTSHLYTALHNAGISVFKDDETLPRGNKISTSLGLAIEESRLYVVVFSKNYAGSLWCLQELEKIMECHKATGQVVVPVFYDIDPSEVRHQTGHFGQAFRNLEAYMNLKMEEEMLPGWQMMVHECPGISGPSVFRDCNGQSEILERIHRLVEDWRVSLRKIVSISPVSGFGRGMLIAEQLIDLLVKHWRTTLRIMEMSSNIDLLLKHWSEALWKAAGISGGADLISNEMTAPLDPAIYLLVEDWRKAHRAVRDISEGVVLKSIVEEEIRKDFEVLVIHWKEALHEAAGISRFVVLNPTLGKEIGCMACTSRRNFGARPEMKQLRRNDGGKPTTGFARCSNSLKYLLTKPFLVSIDKCWAKKFSKQKNKIRIKHTLRTIIDLSLCHIYFIEMLVSTTMQWMNLMENRRLYNYNFLLKFLLNFDAYLDTPFLCFYYVFNYRNESEAIKTIVENVKPLLDKTELFVADNPVGVEPRVQEMIELLDQIQSNGVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEVKSFLASIREVWGQDAGQVYLQEQLIFDIGKETNTKIRNVDSGKVMLKERLRNKRVLLILDDVNNLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRRVDKVFRMKGMDEDESIELFSWHAFKQASPREDFIELSRNVVAYSAGLPLALEVLGSYLFDMEVTEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFTGKDRNDVIHILNGCGLCAENGIRVLVERGLVTVDYKNKLGMHDLLRDMGREIIRSKTPMEPEERSRLWFHEDALDVLSKETGTKAIEGLALKLPRTNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSIELENSNVNLLWKEAQVMEKLKILNLSHSHYLTETPDFSNLPNLEKLLLVDCPRLSAISYTIEHLNKVLLINFQDCISLCNLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKRIGYISLCGYEGFSRDVFPSIIWSWMSPTNILSSRVQTFLDVSSLVSLDVPNSSSNHLSYISKDLPLLQSLCIECGSELQLSLNAANILDALYATNFEELESTAATSQMHNMNVLTSIECNNQVHNKGSKNFRRSLLIQMGTSCQVTNILKQRILQNTATSDGGGCLLPGDSYPDWLTFNSEGSSVTFKIPQVKGRNLKKMMCHVHYSSPENITSDGLKNLLVINHSKATIQLYKRNALVSFEDDEWHGVLSKIEPGNKVQIVVVFWSKLTVYKTTIYLIYEPMNQKIEHSHAPNKNVMDSSGDENECVVGTISLQVESIYKPTNDIMEHCHASNKN 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00418 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 754 IPR027417 -
Gma03g00418 1390 Pfam TIR domain 19 184 IPR000157 GO:0007165
Gma03g00418 1390 SUPERFAMILY L domain-like 849 1137 - -
Gma03g00418 1390 Coils Coil 1019 1039 - -
Gma03g00418 1390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 1332 IPR044974 GO:0006952
Gma03g00418 1390 SMART till_3 19 161 IPR000157 GO:0007165
Gma03g00418 1390 Gene3D Ribonuclease Inhibitor 843 1064 IPR032675 -
Gma03g00418 1390 ProSiteProfiles TIR domain profile. 18 155 IPR000157 GO:0007165
Gma03g00418 1390 Gene3D - 659 743 IPR042197 -
Gma03g00418 1390 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 1332 - -
Gma03g00418 1390 Gene3D - 14 195 IPR035897 -
Gma03g00418 1390 CDD AAA 501 658 - -
Gma03g00418 1390 Gene3D - 488 653 IPR027417 -
Gma03g00418 1390 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 139 IPR035897 -
Gma03g00418 1390 PRINTS Disease resistance protein signature 524 539 - -
Gma03g00418 1390 PRINTS Disease resistance protein signature 932 948 - -
Gma03g00418 1390 PRINTS Disease resistance protein signature 601 615 - -
Gma03g00418 1390 PRINTS Disease resistance protein signature 694 708 - -
Gma03g00418 1390 SUPERFAMILY "Winged helix" DNA-binding domain 729 836 IPR036390 -
Gma03g00418 1390 Pfam NB-ARC domain 506 733 IPR002182 GO:0043531
Gma03g00418 1390 SMART AAA_5 521 661 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00418 Gma-Chr3 7268206 7298652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00418 467 1049 WRKY Transcription Factor Family AT4G12020 33.831 1.47e-74 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00418 - - gmx:100800776 1731.07