Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00414 ATGGACTTTCTGCGTGATCGGTACAAGGAGGACAACATAaactatgatgtgtttttgagtttcagaggggaagacacgcgtgcttctttcacttcacatctctatacggctcttcacaacttgggaatctttgttttcaaggatgatgagacacttccaaggggaaataaaatttcaccctcgctgcggttagcaattgaagagtctcgactttctgttgttattttctctagaaactatgcagagtcgcggtggtgtttgaaagagttggagaaaataatggagtgtcacagaacaacagggcaagtggtagtgccagtgttctatgatgtagatccctctgaagtacgtcatcaaacaggccactttggaaaagcatttcgaaaCCTTGAGAACAAACTTTTAAAAGGGGAAGAGGAAGAGGAAGAGGAAAAGCTACAACGATGGTGGAAGACGCTTGCTGAGGCCGCTGGCATCTCAGGGCTTTCTGTAGTCCGAAATTGCAAGAATGAAAGTGAGGCTATCAAAACTATTGTTGAAAATGTTAAGCGTTTGTTAGACAAGACAGAGTTGTTCGTTGCTGATAATCCAGTCGGCGTAGAACCACGAGTCCAGGAAATGATTGAACTATTAGGCCAAAAACAatcaaacgatgttctactactcgggatgtgggggatgggaggcattggtaaaacaactattgaaaaagccatttacaataagattggccgcaattttgagggaaaaagcttcctcgcacatattaggggaatttgggagcaagatgctggtcaagtatatctacaagaacaacttctatttgatatcgaaaaagaaacaaacacaaagatacgtaatgttgaatcaggaaaagttatgttaaaagaacgacttcgccataaaaaggtacttcttatacttgatgatgtaaataaattgcatcaattgaatgttttgtgtggaagtcgtgaatggtttggttcagggagtagaataatcatcacaactagagatatgcatatacttagagggagaagagttgacaaagtgttcagaatgaaaggactggatgaagatgaatctattgagctttttagttggcatgcatttaagcaagcaagtccaagagaagattttattgaactttctagaaatttagttgcttattctgcgggattgccactagctcttgaagtccttgggtcctatttgtttgatatggaggtaacagagtggaagaatgtattggagaaactcaagaaaattcctaatgatgaagtacaagagaaattaaaaataagctatgatggtttaactgatgatacagagaaaggaatattccttgatatagcttgtttctttatcggaatggaccggaatgatgttatacatatcttaaatggttgtgggctttgtgcagaaaatggaatacgtgtcttggtagaaagaagccttgtaactgtagattataagaacaagcttggaatgcatgatttgctgcgagacatgggaagagaaatcattcgttcagaaacaccaatggagcttgaggagcgtagtaggttatgttttcatgaagatgcacttgatgtattatcaaaagaaactggaacaaaagctattgagggtctggctttgaagttaccaagaaataatacaaaatgtttgagcactaaagcttttaaggagatgaaaaaactcaggttgcttcaacttgctggtgtacaactggttggagatttcaagtatctttccaaagatcttagatggctttgttggcatggatttcctttagcatgcataccaacaaacctttatcaaggaagtctagtttccattgagctacaaaacagcaGTGTTAATCTTTTGTGGAAAGAAGCCCAGGTAATGgagaagttgaaaattcttaatctcagtcattctcattatttaactcagactccagacttttcaaatttgcctaatcttgaaaagctattactcgtagattgtccaaggttgtccgagatttcctataccattggacatctcaataaagttcttctattaaattttcaaaattgtattagccttcgtaagcttccaagaagtatctataagttgaaatctcttaaagcactcattctttcaggatgtttaaagattgacaagttagaagaggatttggaacaaatggagtctttgacaacccttattgcggataagactgcaataacaagagtgccattttcaatagttagatcaaaaaGAATTGGATATATCTCTTTGTGCGGCTATGAAGGATTCTCACGTGATGTGTTTCCTTCAATCATTTGGTCTTGGATGTCACCAACAAATAGTCTCTCATCCCGCGTTCAAACATTTCTAGATGTGTCATCTCTCGTTTCTTTAGACGTGCCAAATAGTAGTTCCAATCATCTATCATATATTTCTAAGGACCTTCCACTGCTTCAAAGTCTTTGTATAGAGTGTGGCTCAGAACTTCAACTTTCTCTAGATGCTGCAAATATTTTGGATGCTTTATATGCCACAAATTTTGAAGAATTAGAATCAACTGCAGCCACATCGCAAATGCATAATATGAATGTTTTAACATTAATTGAATGCAACAATCAAGTACACAACTTAGGATCAAAAAATTTCAGGAGATCACTTTTAATTCAAATGGGAACGAGTTGTCAAGTCACCAATATTCTGAAACAGAGAATTTTACAGAATATGACAACTAGTGATGGTGGTGGTGGTTGTTTGCTCCCCGGTGATAGCTATCCAGATTGGTTAACCTTCAACAGCGAAGGTTCATCCCTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGAAAATGATGTGCCATGTCCATTATTCTTCCCCGGAAAATATAACTTCAGATGGTTTGAAACATTTGTTGGTGATAAATCACACAAAGGCCATCATTCAACTTTATAAGAGAAATGCATTAGTCTCCTTTGAAGATGAGGAGTGGCAGGGGGTACTATAA 3009 0.1429 MDFLRDRYKEDNINYDVFLSFRGEDTRASFTSHLYTALHNLGIFVFKDDETLPRGNKISPSLRLAIEESRLSVVIFSRNYAESRWCLKELEKIMECHRTTGQVVVPVFYDVDPSEVRHQTGHFGKAFRNLENKLLKGEEEEEEEKLQRWWKTLAEAAGISGLSVVRNCKNESEAIKTIVENVKRLLDKTELFVADNPVGVEPRVQEMIELLGQKQSNDVLLLGMWGMGGIGKTTIEKAIYNKIGRNFEGKSFLAHIRGIWEQDAGQVYLQEQLLFDIEKETNTKIRNVESGKVMLKERLRHKKVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRRVDKVFRMKGLDEDESIELFSWHAFKQASPREDFIELSRNLVAYSAGLPLALEVLGSYLFDMEVTEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMGREIIRSETPMELEERSRLCFHEDALDVLSKETGTKAIEGLALKLPRNNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSIELQNSSVNLLWKEAQVMEKLKILNLSHSHYLTQTPDFSNLPNLEKLLLVDCPRLSEISYTIGHLNKVLLLNFQNCISLRKLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKRIGYISLCGYEGFSRDVFPSIIWSWMSPTNSLSSRVQTFLDVSSLVSLDVPNSSSNHLSYISKDLPLLQSLCIECGSELQLSLDAANILDALYATNFEELESTAATSQMHNMNVLTLIECNNQVHNLGSKNFRRSLLIQMGTSCQVTNILKQRILQNMTTSDGGGGCLLPGDSYPDWLTFNSEGSSLTFEIPQVNGRNLKKMMCHVHYSSPENITSDGLKHLLVINHTKAIIQLYKRNALVSFEDEEWQGVL 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00414 1002 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 161 IPR035897 -
Gma03g00414 1002 SUPERFAMILY L domain-like 546 876 - -
Gma03g00414 1002 Coils Coil 716 736 - -
Gma03g00414 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 451 IPR027417 -
Gma03g00414 1002 Gene3D - 356 440 IPR042197 -
Gma03g00414 1002 Coils Coil 127 147 - -
Gma03g00414 1002 PRINTS Disease resistance protein signature 629 645 - -
Gma03g00414 1002 PRINTS Disease resistance protein signature 298 312 - -
Gma03g00414 1002 PRINTS Disease resistance protein signature 391 405 - -
Gma03g00414 1002 PRINTS Disease resistance protein signature 221 236 - -
Gma03g00414 1002 ProSiteProfiles TIR domain profile. 13 157 IPR000157 GO:0007165
Gma03g00414 1002 Gene3D - 193 350 IPR027417 -
Gma03g00414 1002 Gene3D - 12 192 IPR035897 -
Gma03g00414 1002 Pfam NB-ARC domain 203 431 IPR002182 GO:0043531
Gma03g00414 1002 Pfam TIR domain 14 184 IPR000157 GO:0007165
Gma03g00414 1002 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 23 1001 - -
Gma03g00414 1002 SUPERFAMILY "Winged helix" DNA-binding domain 426 530 IPR036390 -
Gma03g00414 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 1001 IPR044974 GO:0006952
Gma03g00414 1002 Gene3D Ribonuclease Inhibitor 535 767 IPR032675 -
Gma03g00414 1002 SMART till_3 14 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00414 Gma-Chr3 6983039 7012865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00414 14 746 WRKY Transcription Factor Family AT4G12020 31.467 2.03e-81 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00414 - - gmx:100801314 1660.58