Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00413 ATGGACATTGCTAATAAAATAGACTACTTTGTGGAGCGTTGGAGGGACGGACTTTGTGTTGCCACTCGCATCCCGTGGAGAGGAATGTTGATTGCTGAAAAGTTAATAGATCTCCTTGTGAAGCATTGGAGGGAAACACTGTGTGAGGCACTTTGTGAGGCTGTTGGTTTCTCAGATGGTGCAGACTTATATTACAGAGAAATTGAGATGGTTTATAAAATAGAACCGCTTGTGGTGAATTGGAGTACGGCACTTGGCGAGGCTGCAGGTAGCATCTCGGGGGGTGCACACCTAAATTCCCAAGGGAAGTTTGCTAATGAGATAAGCCTCCTCATGAAGCATTGGAGGGAGGCACTTTGTGAGCATAATGGCATCCCATTGGTTTTCCTCTTAAATTTCAGTGTTGAAGAGGAGATTATAAGAGATTTTAAGGACTTAATGATGTCTTGGAAGGAAGCACTTCGTGAGGCTGCTGGCATCTCGAGGGTTGTAGTCCTAAATTACAGGGGAAAAGTGAAGATTGCTACTGAAGAGAGAAACATCCTCGTGAAACATTGGGCAGAGACACTTCGTGAGGCTGCTAGCATCTCAGGGATTGTAGTCCTAAATTCCAGGAATGAAAGTGAGGCTATCAAAACTATTGTTGAAAACATTACGCGTTTGTTAAACAAGACAGAGTTGTTCGTTGCTGATAATCCAGTCGGCATAGAACCACGAGTCCAGGAAATGATTGAACTATTAGACCAAAAACAatcaaatgatgttctaatactcgggatgtgggggatgggaggcattggtaaaacgactattgcaaaagccatttacaataagattggccgcaattttgagggaaaaagcttcctcgcacatattagggaagtttgggagcaagatgctggtcaagtatatctacaagaacaacttctatttgatatcaaaaaagaaacaaacacaaagatacgtaatgttgaatcaggaaaagttatgttaaaagaacgacttcgccataaaagggtacttcttatacttgatgatgtaaataaattgcatcaattgaatgttttgtgtggaagtcgtgaatggtttggttcagggagtagaataatcatcacaactagagatatgcatatacttagagggagaagagttgacaaagtgttcagaatgaaaggaatggatgaagatgaatctattgagctttttagttggcatgcatttaagcaagcaagtccaagagaagattttattgaactttctagaaatttagttgcttattctgcgggattgccactagctcttgaagtccttgggtcctatttgtttgatatggaggtaatagagtggaagaatgtattggagaaactcaagaaaattcctaatgatgaagtacaagagaaattaaaaataagctatgatggtttaactgatgatacagagaaaggaatattccttgatatagcttgtttctttataggaatggaccggaatgatgttatacatatcttaaatggttgtgggctttgtgcagaaaatggaatacgtgtcttggtagaaagaagccttgtaactgtagattataagaacaagcttggaatgcatgatttgctgcgagacatgggaagagaaatcattcgttcaaaaacaccaatggagcttgaggagcgtagtaggttatggtttcatgaagatgcgcttgatgtattatcaaaagaaactggaacaaaagctattgagggactggctttgaagttaccaagaaataatacaaaatgtttgagcactaaagcttttaaggagatgaaaaaactcaggttgcttcaacttgctggtgtacaactggttggagatttcaagtatctttccaaagatcttagatggctttgttggcatggatttcctttagcatgcataccaacaaacctttatcaaggaagtctagtttctattgagctagaaaacagcaaTGTTAATCTTTTGTGGAAAGAAGCCCAGGTAATGgagaagctgaaaattcttaatctcagtcattctcattatttaacacagactccagacttttcaaatttgcctaatcttgaaaagctattactcatagattgtccaaggttgtccgagatttcctataccattggacatctcaataaagttcttctaataaattttcaagattgtattagccttcgtaagcttccaagaagtatctataagttgaaatctcttaaagcactcattctttcaggatgtttaaagattgacaagttagaagaggatttggaacaaatggagtctttgacaacccttattgcggataagactgcaataacaagagtgccattttcaatagttagatcaaaaaGAATTGGATATATCTCTTTGTGCGGCTATGAAGGATTCTCACGTGATGTGTTTCCTTCAATCATTTGGTCTTGGATGTCACCAACAAATAGTCTCTCATCCCGCGTTCAAACATTTCTAGATGTGTCATCTCTCGTTTCTTTAGACGTGCCAAATAGTAGTTCCAATCATCTATCATATATTTCTAAGGACCTTCCACTGCTTCAAAGTCTTTGTATAGAGTGTGGCTCAGAACTTCAACTTTCTATAGATGCTGCAAATATTTTGGATGCTTTATATGCCACAAATTTTGAAGAATTGGAATCAACTGCAGCCACATCGCAAATGCATAATATGAATGTTTTAACATTAATTGAATGCAACAATCAAGTACACAACTTAGGATCAAAAAATTTCAGGAGATCACTTTTAATTCAAATGGGAACGAGTTGTCAAGTCACCAATATTCTGAAACAGAGAATTTTACAGAATATGACAACTAGTGATGGTGGTGGTGGTTGTTTGCTCCCCGGTGATAGCTATCCAGATTGGTTAACCTTCAACAGCGAAGGTTCATCCCTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGAAAATGATGTGCCATGTCCATTATTCTTCCCCGGAAAATATAACTTCAGATGGTTTGAAAAATTTGTTGGTGATAAATCACACAAAGGCCATCATTCAACTTTATAAGAGAAATGCATTAGTCTCCTTTGAAGATGAGGAGTGGCAGGGGGTACTATCAAAAATAGAGCCTGGAAACAAAGTGCAAATTGTTGTTGTCTTCTGGAGCAAATTAACTGTTCACAAGACAACAATTTATCTCATATATGAACCAATGAATGAAAAAATAGAGCATTCCCGTGCACTAAATAAGAATGTAATGGATTCTAGTGgtgaagaaaatgaatgtgttgttgggaccatctctcttcaagtagaatccatatataagccaacaaatgacataatggagcattgtcatgcatcaaataagaatgcaattgtttccagcagtgatgaaaatgaatgtgttgttgggaccatctctcttcaagtagaatccatatataagccaacaaatgacataatggagcattgccatgcatcaaataagaatgcaattgtttccagcagtgatgaaaatgcatgtgttgtcaggccgttctctcctcaagtggaatccataGATGACTTAAGATGTGTTTCAAAAAAAGGCTTGATTAAGCGCTTATTGAATAAGTTCTTATCATGCGAATACTTTTGTAATGCAAACTCAGAAAATAAGAAAAATCAAGGTTAA 3675 0.1932 MDIANKIDYFVERWRDGLCVATRIPWRGMLIAEKLIDLLVKHWRETLCEALCEAVGFSDGADLYYREIEMVYKIEPLVVNWSTALGEAAGSISGGAHLNSQGKFANEISLLMKHWREALCEHNGIPLVFLLNFSVEEEIIRDFKDLMMSWKEALREAAGISRVVVLNYRGKVKIATEERNILVKHWAETLREAASISGIVVLNSRNESEAIKTIVENITRLLNKTELFVADNPVGIEPRVQEMIELLDQKQSNDVLILGMWGMGGIGKTTIAKAIYNKIGRNFEGKSFLAHIREVWEQDAGQVYLQEQLLFDIKKETNTKIRNVESGKVMLKERLRHKRVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRRVDKVFRMKGMDEDESIELFSWHAFKQASPREDFIELSRNLVAYSAGLPLALEVLGSYLFDMEVIEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMGREIIRSKTPMELEERSRLWFHEDALDVLSKETGTKAIEGLALKLPRNNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSIELENSNVNLLWKEAQVMEKLKILNLSHSHYLTQTPDFSNLPNLEKLLLIDCPRLSEISYTIGHLNKVLLINFQDCISLRKLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKRIGYISLCGYEGFSRDVFPSIIWSWMSPTNSLSSRVQTFLDVSSLVSLDVPNSSSNHLSYISKDLPLLQSLCIECGSELQLSIDAANILDALYATNFEELESTAATSQMHNMNVLTLIECNNQVHNLGSKNFRRSLLIQMGTSCQVTNILKQRILQNMTTSDGGGGCLLPGDSYPDWLTFNSEGSSLTFEIPQVNGRNLKKMMCHVHYSSPENITSDGLKNLLVINHTKAIIQLYKRNALVSFEDEEWQGVLSKIEPGNKVQIVVVFWSKLTVHKTTIYLIYEPMNEKIEHSRALNKNVMDSSGEENECVVGTISLQVESIYKPTNDIMEHCHASNKNAIVSSSDENECVVGTISLQVESIYKPTNDIMEHCHASNKNAIVSSSDENACVVRPFSPQVESIDDLRCVSKKGLIKRLLNKFLSCEYFCNANSENKKNQG 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00413 1224 Pfam NB-ARC domain 239 466 IPR002182 GO:0043531
Gma03g00413 1224 Gene3D - 220 386 IPR027417 -
Gma03g00413 1224 PRINTS Disease resistance protein signature 427 441 - -
Gma03g00413 1224 PRINTS Disease resistance protein signature 257 272 - -
Gma03g00413 1224 PRINTS Disease resistance protein signature 334 348 - -
Gma03g00413 1224 PRINTS Disease resistance protein signature 665 681 - -
Gma03g00413 1224 SUPERFAMILY "Winged helix" DNA-binding domain 462 569 IPR036390 -
Gma03g00413 1224 SMART AAA_5 254 394 IPR003593 -
Gma03g00413 1224 Coils Coil 752 772 - -
Gma03g00413 1224 Gene3D - 171 219 IPR035897 -
Gma03g00413 1224 Gene3D - 392 476 IPR042197 -
Gma03g00413 1224 SUPERFAMILY L domain-like 582 911 - -
Gma03g00413 1224 CDD AAA 234 391 - -
Gma03g00413 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 487 IPR027417 -
Gma03g00413 1224 Gene3D Ribonuclease Inhibitor 575 797 IPR032675 -
Gma03g00413 1224 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 141 1066 - -
Gma03g00413 1224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 141 1066 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00413 Gma-Chr3 6920913 6939809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00413 184 782 WRKY Transcription Factor Family AT4G12020 33.496 3.53e-75 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00413 - - gmx:100800776 2426.74