Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00412 ATGATATCCAAGCCATTGTCTCCTGCTCGAGAGGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTAAAGAGGAAGCTATCAGAATTGCTAATGACACTAATGCAGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAACAGTCTGGCCTCGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTAGAGTTAGGGGATTGTGTTGAATTGTTAATAGCACTTTTAGATGTTTTGGGTCAATGGGTATGGGCTGATACCTGGGATCCTAGGAGAATGCATTGTGTCATGGATTCCATTCCTGCCACTGCAATTGAAATTGGAGGTGTAGCACCTATACAGACTGATGGTTAG 387 0.4264 MISKPLSPAREEAFGPVAPLLRFKTKEEAIRIANDTNAVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLELGDCVELLIALLDVLGQWVWADTWDPRRMHCVMDSIPATAIEIGGVAPIQTDG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00412 128 Pfam Aldehyde dehydrogenase family 39 76 IPR015590 GO:0016491
Gma03g00412 128 Pfam Aldehyde dehydrogenase family 9 37 IPR015590 GO:0016491
Gma03g00412 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 8 38 - -
Gma03g00412 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 38 76 - -
Gma03g00412 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 8 38 - -
Gma03g00412 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 38 76 - -
Gma03g00412 128 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 9 37 IPR016163 GO:0016620
Gma03g00412 128 SUPERFAMILY ALDH-like 8 75 IPR016161 GO:0016491
Gma03g00412 128 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 49 75 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00412 Gma-Chr3 6902352 6904346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00412 2 76 Aldehyde Dehydrogenase Gene Family AT1G79440 59.000 1.05e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00412 K17761 - gmx:100793318 120.553