Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00397 ATGGCTCCAAAAAATCTCTTTGGTCTCCTCATCTTTCTCATTCTCCTTGTTACTTGCACTGCTTTTTCCTTCCAATTCCATGGCTTCCATAATAGTGAAAGAAATCTCACCCGTGAAGGGGATTCAAATGTCACACCCCAAGGTATACTTCAGCTCACCAAAAGAGAAAACAACATTGTTGGCCATGCATTTTATAACAAACCCATCAAAATATTAGAGAAAACAAATTCTTCAGTGCCCCAAACAAAATTTTCCTCCTTTAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAACTCTGGCCTTGGTGGCTTTGGTCTTGCCTTCACCATAGCTCCCACAACACAATTCCCAGAGGCTGAAGGTGGCCATTTTCTTGGTCTTTTCAACAATTCCAATGATATGAACACCTCAAATCATATCTTGGTGGTTGAATTTGACACAGTGAATGGCTACAAAGATAACACTGACACTGTAGGAAACCATGTTGGGGTAAACATAAATGGCATGCAATCAAAGATAGCTGAGCCTGCAGCATACTTTGAAGAAGGCATGGATGCAAAAAAGGAAGAGTTCAGCATGGAGAAGGAAGATGCTGTTTGTGCTTGGATTGAATATGATGGTGAAACAGAAATCTTGAATGTCACAATAGCCCCTTTAAAGGTATCAAAACCAAGCAAGCCACTTATATCCCAGGCCATTCATGACATCAAGTTTGTTATGAAGGAAACCATGTTTTTTGGTTTCTCTGCATCAACAGGTAAGAGGAAAGCAAGCTCTCATTATATTCTTGGGTGGAGTGTTTCAGTGAATGGGGGAATTGCCCCTCCACTAAATTTTTCACTCCTTCCAAAGCCACCACCAAAGGAGAAAGATGCATCATCTTTTCCTTGGGTCAAGGTTGCAGTTGCCATGTTGTCTGCTTTGACATTTACCTTGTTGTGCCTGTTGTTTATTGTGACACGCTACAAGAGATACATGATATTTGAAACCCTTGAGGACTGGGAGCTTGATTGTCCTCATAGGTTCAGATATAGAGATCTTCACATAGCAACAAAGGGTTTCATAGAGAGCCAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTTTTACCTAGCACAGGAACTGAAGTTGCTGTCAAAAGAATCATGAGAAGTCCAATGCAAGGGATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTCAACCTTCAAGGGTGGTGCAAGCACAAGAATGATCTAATCCTAATTTATGACTACATTCCAAATGGTAGTCTTGACTCTCTCCTATTCAACGATAACATTGCTTTGGATTGGGATCAGAGATTCAATATCATCAAAGGTGTAGCTGCAGGGTTGTTGTATCTTCATGAAGAGTGGGAGCAAGTTGTGATCCATAGAGATGTGAAATCAAGCAATATTCTAATAGATGGCGAGTTCAATGCTCGTTTGGGTGATTTTGGACTAGCTAGGCTTTATAGCCATGATCAAGTGTCACACACAACAAGTGTTGTTGGCACCATTGGGTATATTGCACCAGAGTTAACTAGAACAGGAAAAGCCTCTGCAAGCTCTGATGTGTATGCATTTGGGGTCCTACTTCTTGAAGTGGTTGCTGGCACAAGACCTGTTGGCTCTTCAGGCCAGTTTTTGTTGGTGGATTGGGTTCTTGAGAATTGCCAACTGGGTCAGATTCTTGAAGTGGTTGATCCTAAGCTAGGTTCTGCTTATGATGAGGAGGAAATGGAGTTGGTGCTGAAATTGGGTCTCTTGTGTTCACAATACAAAGCTGAGTATAGACCTTCTATGAAACAAGTGGCTAGGTACCTAAACTTTGATGACTCTCTTCCTGATATCTCTGATTGGAGATACTATGATTCTCAAAGCAGCACAAATAGCTTAAGTTTCTTAGAAGCCATGTCTACGGGAAAGATTGCATCTTCATACAGTTTATCTTCCATTGGCAGCAGAATTCCAGTGACTCAAAAGCAAACCTTAGGCAGATACAAAGCATGCACGGAGGGCGTGATGACCTGCAAGAACCGCTCCAGATTACTCAACCGGTTCGCCACCGATTCACACGAAGGAACCACGCCGCTCTTATTTGCCTCATCCGACCCGACCCGATTTGTCTCCGACGGAGCGAGACGCGGTGACATCACTGTGGACCCTACGAAGCTTGTCATTCTCCATGGTGTGAAGCGCTCGGCGAGCCTTCGCCGGAGAATAGAATCGATCCTCGCAGTCGCCGCGAGCGCGCCCGAAGTTCAAGCCAGTACCCAACATTCCTATCAGCCTAAATTTTATTTTTGGGAATAA 2352 0.4324 MAPKNLFGLLIFLILLVTCTAFSFQFHGFHNSERNLTREGDSNVTPQGILQLTKRENNIVGHAFYNKPIKILEKTNSSVPQTKFSSFSTCFVFSIVSPNSGLGGFGLAFTIAPTTQFPEAEGGHFLGLFNNSNDMNTSNHILVVEFDTVNGYKDNTDTVGNHVGVNINGMQSKIAEPAAYFEEGMDAKKEEFSMEKEDAVCAWIEYDGETEILNVTIAPLKVSKPSKPLISQAIHDIKFVMKETMFFGFSASTGKRKASSHYILGWSVSVNGGIAPPLNFSLLPKPPPKEKDASSFPWVKVAVAMLSALTFTLLCLLFIVTRYKRYMIFETLEDWELDCPHRFRYRDLHIATKGFIESQLIGVGGFGAVYKGVLPSTGTEVAVKRIMRSPMQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLILIYDYIPNGSLDSLLFNDNIALDWDQRFNIIKGVAAGLLYLHEEWEQVVIHRDVKSSNILIDGEFNARLGDFGLARLYSHDQVSHTTSVVGTIGYIAPELTRTGKASASSDVYAFGVLLLEVVAGTRPVGSSGQFLLVDWVLENCQLGQILEVVDPKLGSAYDEEEMELVLKLGLLCSQYKAEYRPSMKQVARYLNFDDSLPDISDWRYYDSQSSTNSLSFLEAMSTGKIASSYSLSSIGSRIPVTQKQTLGRYKACTEGVMTCKNRSRLLNRFATDSHEGTTPLLFASSDPTRFVSDGARRGDITVDPTKLVILHGVKRSASLRRRIESILAVAASAPEVQASTQHSYQPKFYFWE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00397 783 SMART serkin_6 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00397 783 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 288 IPR013320 -
Gma03g00397 783 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Gma03g00397 783 Gene3D Transferase(Phosphotransferase) domain 1 432 634 - -
Gma03g00397 783 CDD lectin_legume_LecRK_Arcelin_ConA 22 272 IPR001220 GO:0030246
Gma03g00397 783 PANTHER - 12 658 - -
Gma03g00397 783 SUPERFAMILY Protein kinase-like (PK-like) 339 635 IPR011009 -
Gma03g00397 783 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 12 658 - -
Gma03g00397 783 Pfam Protein kinase domain 357 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00397 783 Gene3D - 20 274 - -
Gma03g00397 783 Pfam Legume lectin domain 23 281 IPR001220 GO:0030246
Gma03g00397 783 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Gma03g00397 783 CDD STKc_IRAK 361 622 - -
Gma03g00397 783 ProSiteProfiles Protein kinase domain profile. 355 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00397 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00397 Gma-Chr3 6613467 6616942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00397 24 638 Receptor kinase-like Gene Family AT5G01560 50.958 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma03g00397 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00397 - - gmx:100792854 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00397 03 6613467 6616942 Gma03g00397 03 6613467 6616942 ECH