Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00380 ATGACACTTTCTTCGTTTTTGTATATTGTTTTCATATTTCATTTCTTCTTCACATCCCCCTCACTCTCTTTGTCGTCCGATGGGCTCGCGCTTCTCGCCCTAAAGTCCGCCGTGGACGAGCCCTCCGCCGCAGCTTTCTCCGACTGGAACAACGGCGACCCCACGCCTTGTGCCTGGTCGGGGATCGCCTGCGCCAATGTCTCCGGCGAGGGGGAGCCGCGAGTTGTCGGAATTTCCCTCGCCGGAAAATCGCTCTCTGGCTACCTCCCCTCGGAGCTCGGCACGCTGCGGTTCCTCCGGCGACTCAACCTCCACGACAACGCCTTCTCCGGCGTCCTCCCGGCGCAGCTCTCCAACGCCACCGCGCTCCACAGCCTCTTCCTTCACGGAAACAACCTCTCCGGCGCAATCCCCTCCTCCCTCTGCACCCTCCCCCGCCTCCAGAACCTTGACCTCTCCGAAAACGCCTTCTCCGGCCACATCCCGGAGCACCTCAGAAACTGCAAGAACCTCCAGCGCCTCGTCCTCGCCGGCAACAAATTCTCCGGCGAGATTCCGGCCGGCGTGTGGCCGGACCTGCAAAACCTCCTCCAACTCGACCTCTCCGATAACGAGTTAACAGGCTCAATCCCCAGCGAAATCGGAACCCTAATTTCCCTCTCCGGCACGCTGAACCTCTCCTTCAACCACCTCTCCGGTAAAATTCCGTCTTCGTTGGGAAAATTACCGGCAACAGTGATCTTTGACCTCAAAAACAATAACCTCAGCGGCGAGATTCCCCAGACGGGGTCGTTTTCCAACCAGGGCCCCACCGCGTTCCTCGGAAACCCAGACCTATGCGGGTTTCCACTCAGGAAATCGTGTTCTGGTTCGGACCGAAATTTTTCTTCCGGTTCGGACCAGAACAAACCGGACAACGGTAACCGGTCCAAGGGGCTGAGTCCGGGGCTAATTATTTTAATCTCGGCAGCTGATGCTGCTGTGGTGGCCTTGATTGGTCTTGTGATTGTTTACATTTATTGGAAGAGAAAGGATGATGAGAATGCTTGTAGTTGCATTAGGAAGAGGAGTTTTGGTGAAGAGAAAGGGAACATGTGTGTGTGTGGTGGGTTATCATGTTTTGGTGGGGTGAAGAGTGATGATGATGATGATGAAGAGTTTGAAGGTGGTGAGGGTGAGGGTGAAGGGGAATTAGTGAGGATTGATAAGGGTTTGAGTTTTGAGCTTGATGAGTTGTTGAGGGCTTCAGCTTATGTGTTGGGGAAGAGTGGATTGGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTTCCTGTGGCTGTGAGGAGGTTGGGGGAGGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTGAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGGCTCATGCCCTTAGAGGTTA 1505 0.5415 MTLSSFLYIVFIFHFFFTSPSLSLSSDGLALLALKSAVDEPSAAAFSDWNNGDPTPCAWSGIACANVSGEGEPRVVGISLAGKSLSGYLPSELGTLRFLRRLNLHDNAFSGVLPAQLSNATALHSLFLHGNNLSGAIPSSLCTLPRLQNLDLSENAFSGHIPEHLRNCKNLQRLVLAGNKFSGEIPAGVWPDLQNLLQLDLSDNELTGSIPSEIGTLISLSGTLNLSFNHLSGKIPSSLGKLPATVIFDLKNNNLSGEIPQTGSFSNQGPTAFLGNPDLCGFPLRKSCSGSDRNFSSGSDQNKPDNGNRSKGLSPGLIILISAADAAVVALIGLVIVYIYWKRKDDENACSCIRKRSFGEEKGNMCVCGGLSCFGGVKSDDDDDEEFEGGEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLAHALRG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00380 501 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Gma03g00380 501 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Gma03g00380 501 PANTHER - 9 501 - -
Gma03g00380 501 SUPERFAMILY Protein kinase-like (PK-like) 419 500 IPR011009 -
Gma03g00380 501 SMART LRR_typ_2 193 217 IPR003591 -
Gma03g00380 501 SMART LRR_typ_2 96 119 IPR003591 -
Gma03g00380 501 SMART LRR_typ_2 144 168 IPR003591 -
Gma03g00380 501 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Gma03g00380 501 Gene3D Phosphorylase Kinase; domain 1 405 489 - -
Gma03g00380 501 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gma03g00380 501 SUPERFAMILY L domain-like 25 285 - -
Gma03g00380 501 Pfam Leucine Rich Repeat 223 242 IPR001611 GO:0005515
Gma03g00380 501 ProSiteProfiles Protein kinase domain profile. 414 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00380 501 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 501 - -
Gma03g00380 501 Pfam Protein tyrosine and serine/threonine kinase 420 500 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00380 Gma-Chr3 6336671 6338175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00380 18 501 Receptor kinase-like Gene Family AT1G67510 67.901 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma03g00380 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00380 - - gmx:100787556 912.909