Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00379 GGAGAAATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAGAATCGCCAAAGGAACAGCGAGGGGCCTGGCCTATCTCCACGAATGCAGTCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATCCTGCTAGACAACGACTTTCAACCCTACATATCCGATTTTGGCCTCAACCGTCTAATCAGCATCACCGGCAACAACCCCTCCACCGGTGGATTCATGGGTGGAGCTCTTCCTTACATGAACTCATCACAGAAAGAGAGAACCAACAATTACAAAGCCCCCGAGGCTCGAGTCCCTGGCTGCAGAACCACCCAGAAATGGGATGTGTATTCGTTTGGAGTTGTCCTGCTTGAAATACTAACTGGGAGGTCACCAGAGTCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTGGTAAGGTGGGTTAGAAAAGGATTCGATCAAGAAAGCCCATTATCCGAAATGGTTGATCCATCTCTGCTCCAAGAAGTGCGCGTCAAGAAAGAGGTTCTGGCTGTGTTTCATGTTGCACTGTCTTGCACTGAGGAAGATCCAGAGGCTCGGCCTAGGATGAAAACTGTCTGCGAAAATCTTGATAAGATTGGAACGTAA 635 0.4913 RNGQPSTNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMNSSQKERTNNYKAPEARVPGCRTTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALSCTEEDPEARPRMKTVCENLDKIGT 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00379 210 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 1 210 - -
Gma03g00379 210 SUPERFAMILY Protein kinase-like (PK-like) 7 205 IPR011009 -
Gma03g00379 210 Pfam Protein kinase domain 15 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00379 210 SMART tyrkin_6 3 205 IPR020635 GO:0004713|GO:0006468
Gma03g00379 210 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 210 - -
Gma03g00379 210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Gma03g00379 210 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00379 210 Gene3D Transferase(Phosphotransferase) domain 1 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00379 Gma-Chr3 6333035 6333669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00379 1 208 Receptor kinase-like Gene Family AT1G67510 67.568 1.29e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma03g00379 Pkinase 2.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00379 - - gmx:100787556 421.009