Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00377 ATGCAGCTGGCGAAGAAGCGAGCCGACAACCGTATTCTGATCGGCGAGTCCGGAGCGGTGGCCGCTCTGATTCCGCTGCTCTGGTGCAGTGATTCGTGGACGCAGGAACACGCGGTGACGGCGTTGCTGAACCTGTCTCTTTTGGAAGAGAACAAGGCGTTTATAACGAATGCGGGTGCAGTGAAGTCGCTAATATACGTGCTGAAAAGAGGGACGAAGACTTGGAAGCAGCACGCGGTgacactgcattttgatacctgtggaactgcaaagagtacttggataaggcagttcgcattatcctga 306 0.4379 MQLAKKRADNRILIGESGAVAALIPLLWCSDSWTQEHAVTALLNLSLLEENKAFITNAGAVKSLIYVLKRGTKTWKQHAVTLHFDTCGTAKSTWIRQFALS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00377 101 Pfam Armadillo/beta-catenin-like repeat 9 46 IPR000225 GO:0005515
Gma03g00377 101 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 80 - -
Gma03g00377 101 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 18 60 IPR000225 GO:0005515
Gma03g00377 101 SUPERFAMILY ARM repeat 3 77 IPR016024 -
Gma03g00377 101 Gene3D - 1 91 IPR011989 -
Gma03g00377 101 PANTHER U BOX DOMAIN-CONTAINING 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00377 Gma-Chr3 6307610 6309469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00377 3 84 U-box Gene Family AT2G23140 51.220 4.52e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00377 - - gsj:114425906 142.895