Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00376 ATGGAGCTCAAACTCCACACATCAATGACTTCCATTCCACGTGCAATCTTCACCCATTCCTCTTCCTCCATTCCTTTTTGTACCTATGCGGTTCTCGATGCTAGCAGGAATGATGTTGAGCTACTTCAAGAAATCATCAATCTTGTGCTGATGACGTTGAGAAAGCATACAGTAGATTCAAAAGGGCTGGTTGGCATTGACAAACAAGTTGCACATTTAGAATCTTTGTTAAAACAAGAGTCAAAAGATGTCTGTGTTATCGGAATTTGGGGTGTGGGCGGTATTGAGCAGCTGGAAGAATTATTTGGAACTCCAGACTGGTATGGGTCAGGTAGTAGAATTATTATAACAACTAGAGATATAAAAGTTCTTATAGCCAACAAAGTTCCTGAAATATACCATGTTGGTGGATTGAGTTCCTGTGAAGCATTTCAGCTTTTTAAGTTGAATGCCTTTAACCAAGGTGATCTTGAAATGGAGTTTTACGAGCTATCAAAGAGGGTGGTTGATTATGCCAAGGGCATTCCATTAGTTCTTAAAATATTGGCTCATCTTCTTTGTGGAAAAGATAAGGAGGTATGGAAAAGTCAACTAGAAAAGCTTAAAGGAATCAAGAGTAACAATGTTCATGATTTTGTGAAACTTAGTTTTGACGATCTACACCATGAAGAACAAGAGATTCTTTTAGATCTTGCATGTTTCTGCCGTAGAGCAAATATGACAGAGAATTTTAATATGAAAGTGGATTCTATAAACATATTATTGGGAGATTGTGGAAGTCATAATGCAGTGGTTGTTGGGTTAGAAAGGCTGAAAGAAAAATCTCTTATAACTATTTCTGAAGATAATGTTGTATCTATGCATGATACTATACAAGAAATGGCATGGGAGATTGTTTGCCAAGAATCTAATGACCTTGGAAATCGCAGTCGATTATGGGATCCTATTGAGATCTATGATGTTTTGAAAAATGACAAGGGGACTAAGGCAATTAGAAGCATAACAACACCTTTGTCAACATTGAAGAATCTGAAGTTACGTCCTGATGCATTTGTTAGGATGAGCAATCTACAATTTTTGGATTTTGGTAATAATTCTCCTTCTCTTCCACAAGGGCTTCAATCTTTGCCAAATGAGTTAAGATATCTTCATTGGATGCATTACCCTTTGACATGCTTGCCAGAGCAATTTTCTGCTGAGAAGCTTGTTATATTAGACTTGTCATGTAGCAGAGTGGAAAAATTATGGCATGAAGTGAAAAATCTGGTGAATTTAAAGAATGTTAAACTCCGTTGGTGTGTATTGCTGAATGAGCTTCCAGACTTCTCAAAATCCACAAATCTCAAGGTACTGGATGTTAGTTGTTCCAGTGGGTTGACTAGTGTGCATCCATCTATTTTCTCTCTACACAAGCTTGAGAAATTGGACCTTAGTGGATGCAGTTCCCTCATCAAATTTTCAAGTGATGATGGTCATTTAAGCTCCCTACTTTATCTCAACCTCAGTGACTGTGAAGAACTAAGGGAATTCTCAGTGACAGCCGAGAATGTGGTTGAACTAGATTTAACCGGCATTCTCATCAGTTCATTGCCCTTGTCTTTTGGAAGTCTACGAAAGTTAGAAATGCTACATCTAATACGTAGTGACATTGAAAGCTTGCCAACATGCATCAATAATCTTACAAGACTGCGATATCTTGACTTGAGTTGTTGCAGCAATCTCTGCATTCTACCGAAGCTTCCCCCATCCCTTGAAACTCTACATGCTGATGAGTGTGAATCACTGGAGACTGTATTGTTCCCTTCCACGGCAGTTGAACAATTTGAGGAAAACAGGAAACGAGTTGAGTTTTGGAATTGCTTAAAGTTGGATGAATTTTCTCTGATGGCTATTGAGTTAAATGCGCAAATCAATGTAATGAAATTTGCATACCAACATTTATCAGCACCAATACTTGATCATGTGGAAAATTACAATGATTACAAGGATCTCCATGATTCTTATCAAGCAGTGTACATGTATCCAGGAAGCAATGTTCCAGAGTGGTTGGCATATAAGACTAGAAAGGATTATGTAATTATTGATCTCTCTTCTGCTCCACCTGCTCATTTGGGTTTCATTTTCTGCTTCATTCTGGACAAGGACACGGAGGAGTTTTTGGATCCTGCATTGCAATTTAGCATCTCTATCAGTAATGGTGAGAATGAATGTAAAAGGGACAGTGTTGAAATACAAACTTCTGGGCCATATTCTATGATTTATTCGGACCATGTTTGTGTGTTGTATGACAAACGATGTTCTTGCTACCTGAACAACAGACTTAAAAGTCTGGCAAAGTTTAAAATCAAAGTATCATGGCTTACAGATGGTGAACGGTGGGAGGCGTTAAAAGGGTTTGGGGTCAGCCCAATAAACACCTCAGTATATCACAATTTTGTTCAACAAATGGAACTGTGCGACCAAGGTTTTAGGCCGGTGTTGAAGCGAACTCCAAAGAAAAGGAAAAGGTGA 2511 0.3839 MELKLHTSMTSIPRAIFTHSSSSIPFCTYAVLDASRNDVELLQEIINLVLMTLRKHTVDSKGLVGIDKQVAHLESLLKQESKDVCVIGIWGVGGIEQLEELFGTPDWYGSGSRIIITTRDIKVLIANKVPEIYHVGGLSSCEAFQLFKLNAFNQGDLEMEFYELSKRVVDYAKGIPLVLKILAHLLCGKDKEVWKSQLEKLKGIKSNNVHDFVKLSFDDLHHEEQEILLDLACFCRRANMTENFNMKVDSINILLGDCGSHNAVVVGLERLKEKSLITISEDNVVSMHDTIQEMAWEIVCQESNDLGNRSRLWDPIEIYDVLKNDKGTKAIRSITTPLSTLKNLKLRPDAFVRMSNLQFLDFGNNSPSLPQGLQSLPNELRYLHWMHYPLTCLPEQFSAEKLVILDLSCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVSCSSGLTSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDGHLSSLLYLNLSDCEELREFSVTAENVVELDLTGILISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRVEFWNCLKLDEFSLMAIELNAQINVMKFAYQHLSAPILDHVENYNDYKDLHDSYQAVYMYPGSNVPEWLAYKTRKDYVIIDLSSAPPAHLGFIFCFILDKDTEEFLDPALQFSISISNGENECKRDSVEIQTSGPYSMIYSDHVCVLYDKRCSCYLNNRLKSLAKFKIKVSWLTDGERWEALKGFGVSPINTSVYHNFVQQMELCDQGFRPVLKRTPKKRKR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00376 836 SUPERFAMILY "Winged helix" DNA-binding domain 208 323 IPR036390 -
Gma03g00376 836 SUPERFAMILY L domain-like 338 620 - -
Gma03g00376 836 Gene3D - 137 221 IPR042197 -
Gma03g00376 836 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 30 95 - -
Gma03g00376 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 231 IPR027417 -
Gma03g00376 836 PRINTS Disease resistance protein signature 467 483 - -
Gma03g00376 836 PRINTS Disease resistance protein signature 86 101 - -
Gma03g00376 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 95 IPR044974 GO:0006952
Gma03g00376 836 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 95 821 - -
Gma03g00376 836 Pfam NB-ARC domain 109 202 IPR002182 GO:0043531
Gma03g00376 836 Gene3D Ribonuclease Inhibitor 320 514 IPR032675 -
Gma03g00376 836 Gene3D Ribonuclease Inhibitor 515 641 IPR032675 -
Gma03g00376 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 95 821 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00376 Gma-Chr3 6290994 6295123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00376 98 578 WRKY Transcription Factor Family AT4G12020 36.145 7.51e-60 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00376 - - gmx:100781152 1487.24