Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00372 ATGGTAGCTTGCATTGCTGATCCGAATACCAGCGTAGGTTATTCAAAAGATCATCATCATCGTTGGGTTCCTTTCAGGGTCAAAGTGAAACTGCTTCTTTCTTCTATTAAACAGCAGAAAAAAGGAGAAAAAAGAGTTTGTTCCAATTCAATGGCAAACTCTTCTTCCGGAGCTTCGGCAATAAAATATGTTCTTTTTCATTGTTTCTTTATTATTTCCGGACTGATGGATGTGGCCTCCAAGCAAATGCCAGATTATGTTCCTCAAATAAAATATGATGTGTTTGTGAACTTTAGGGGCGATGACATCCGTCGAGATTTTCTTGGTCATTTGACTAAGGAATTTCGTCGAAAGCAAATTCATGCCTTTGTAGATGATAAACTTAAGACTGGAGACGAACTATGGCCATCATTTGTTGAAGCAATTCAAGGATCATTGATTTCGTTGACCATATTATCTGAAAACTATGCTTCTTCATCCTGGAGTTTGAATGAACTTGTGACAATACTTGAGTGCAGGGAGAAATACAATCGAATAGTGATACCTGTTTTCTACAAGGTATATCCTACAGATGTACGACATCAAAATGGGAGTTATAAAAGTGATTTTGCTGAACATGAAAAGAAATATAATTTGGCCACAGTGCAAAACTGGAGACATGCTTTGAGCAAGGCTGCTAATTTATCTGGAATAAAGTCATTCAATTATAAGACTGAAGTTGAGCTGCTTGAAAAAATCACCGAATCTGTTAATCTTGAGTTAAGGAGGTTGCGTAACCATCCACATAACTTAAAAGGGGTTATAGGAATTGAAAAGCCAATTCAAAGTTTGGAATCATTGATACGTCAAAAGTCAATAAATGTCAATGTTATTGGAATTTGGGGTATGGGTGGTATCGGAAAGACCACCATTGCAGAAGCAATGTTTAACAAGCTATATTCTGAATATAATGCTTCTTGCTTTTTGGCAAACATGAAGGAAGAATATGGAAGACGTGGAATAATTTCTTTGAGGGAAAAACTTTTTTCTACACTGCTAGTTGAAAATGAGAAAATGAATGAGGCAAATGGATTGTCTGAATATATTGTGAGAAGGATTGCTGGTATGAAGGTTTTAATTGTTCTTGATGATGTGAACCACTCGGATCTACTAGAAGAATTATTTGGAGACCATCATTGGTTTGGACCAGGCAGTAGAATCATTATAACAAGTAGAGACAAACAAGTGCTTATAGCTAATAAGGTTGATGATATATACGAAGTTGGGGCATTGAACTCGAGTCAAGCACTAGAGCTTTTTAGTTTGTATGCCTTTAAAAAAAATCATTTTGATATGGAGTATGATGAGCTATCAAAGAGGGTGGTCAATTATGCCAATGGCATTCCATTAGTTCTTAAAGTTTTGGGTCGTCTCCTTTGTGGAAAAGATAAGGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAGCATGCCAAATAAACATGTTTACAATGCAATGAAATTGAGTTATGATGATCTAGATCGCAAAGAAAAAAATATTTTTTTAGATCTTTCATGTTTCTTCATAGGACTGAATTTGAAAGTGGACCACATAAAAGTTTTATTGAAAGATAGTGAAAGTGATAATTCAGTGGTTGCTGGGTTAGAAAGGCTGAAGGATAAAGCTCTTATAACCATCTCTGAAAATAATATTGTATCTATGCACAATGTTATACAAGAAATGGCATGGGAGATTGTTCGTGGTGAATCTATTGAACACGCTGAAAGTCGTAGCCGATTGATAGATCCTGTTGATATTTGTGATGTATTAGAAAATAACAAGGGGACTGAGGCTATAAGAAGCATAAGGGCTGATTTGTCAGTATTTCTGAAGCTGAAGTTTAGCCCTCACATATTTACTAAGATGAGCAAACTACAATTTTTGAGTTTTACAAACAAACATGATGAAGATGATATTGAGTTTCTTCCTAACGGGCTTCAATCTTTCCCAGATGAGCTAAGATATCTCCATTGGAGGTATTACCCTCTGAAATCCTTGCCAGAGAATTTTTCTGCTGAAAAACTTGTTATACTGGACATGTCAAATAGCCAATTGGAAAAACTTTGGGATGGAGTGCAGAATTTGGTGAATTTAAGAGAAGTAAAAGTCTGTGATTCTAAAAACTTGAAGGAGCTGCCAGACCTTACACAAGCTACAAATCTTGAAGAATTGGATATCAGTGCTTGTCCTCAGTTGACTAGTGTGAATCCGTCTATTTTCTCTCTCAACAAGCTCCAGAGATTGAATATAGGTTACTGTTATATTACCAAAGTTGTAAGCAATAACCATTTAAGCTCCCTTAGATATCTCAGCCTTGGAAGTTGCCCTAATCTAGAGGAATTTTCAGTGACATCAGAGAATATGATTGAGCTAGATCTATCGTATACTCGTGTCAATGCATTGACATCATCTTTTGGACGTCAAAGCAAGCTCAAACTCCTAAGACTTGGCTCCACTGACATAAAGAAATTGCCTTCAAGCTTCAAGAATCTTACTGCACTGCAATATCTGAGTGTAGAATTGTCCAGGCAGCTTCACACTCTAACGGAGCTTCCCCCATCTCTTGAAACTCTTGATGCCACAGGTTGCGTATCATTGAAGACTGTACTGTTTCCATCAATTGCTCAACAATTCAAGGAAAATAGGAGAGATGTTCGCTTTTGGAATTGCTTGAATTTGGATGAACATTCTCGCAAGGCTATTGGGTTAAATGCACGTATTAATGCGATGAAATCTGCGTACCAACATTTATCTGCACCGGATCAAAATTACAATAATTACAGTCGTAAGTACAGATTTTATCAGGACAGTAGGTTATTTTCAAGATTTACATTTCATATCATTATCAGTGATGATGGGGGGTATAAAAGTGAAAAGAGTAGTATCAACATCTACATGTCTGCCCTTCATCTCAGGCCAAATTCGAAACATGTGTGTGTGATTTATGACCAACGATGTTCTCGCTACCTGAACAGTAGAGCTGAAAATAAGAGGAGGCTTAAGATTGAGGTTGAAGTAATGGGAGACACACATCCTGAATGGGGTGCGGAGTTAGAAGCATTCGGGGTCAGTGTAATAAATACCTCAGCATATCACAATTTCGTTCAACAAATAAACACTTCATCAGGTCATAATTTCATTCAACATATAGGAATGTCTGATCCTATGCATTCATTATGCTTGAAATCATCTTGTGCATATCCCTCTTGTGGTTTAGATGAAGACTTTGATTAA 3273 0.3676 MVACIADPNTSVGYSKDHHHRWVPFRVKVKLLLSSIKQQKKGEKRVCSNSMANSSSGASAIKYVLFHCFFIISGLMDVASKQMPDYVPQIKYDVFVNFRGDDIRRDFLGHLTKEFRRKQIHAFVDDKLKTGDELWPSFVEAIQGSLISLTILSENYASSSWSLNELVTILECREKYNRIVIPVFYKVYPTDVRHQNGSYKSDFAEHEKKYNLATVQNWRHALSKAANLSGIKSFNYKTEVELLEKITESVNLELRRLRNHPHNLKGVIGIEKPIQSLESLIRQKSINVNVIGIWGMGGIGKTTIAEAMFNKLYSEYNASCFLANMKEEYGRRGIISLREKLFSTLLVENEKMNEANGLSEYIVRRIAGMKVLIVLDDVNHSDLLEELFGDHHWFGPGSRIIITSRDKQVLIANKVDDIYEVGALNSSQALELFSLYAFKKNHFDMEYDELSKRVVNYANGIPLVLKVLGRLLCGKDKEVWESQLDKLKSMPNKHVYNAMKLSYDDLDRKEKNIFLDLSCFFIGLNLKVDHIKVLLKDSESDNSVVAGLERLKDKALITISENNIVSMHNVIQEMAWEIVRGESIEHAESRSRLIDPVDICDVLENNKGTEAIRSIRADLSVFLKLKFSPHIFTKMSKLQFLSFTNKHDEDDIEFLPNGLQSFPDELRYLHWRYYPLKSLPENFSAEKLVILDMSNSQLEKLWDGVQNLVNLREVKVCDSKNLKELPDLTQATNLEELDISACPQLTSVNPSIFSLNKLQRLNIGYCYITKVVSNNHLSSLRYLSLGSCPNLEEFSVTSENMIELDLSYTRVNALTSSFGRQSKLKLLRLGSTDIKKLPSSFKNLTALQYLSVELSRQLHTLTELPPSLETLDATGCVSLKTVLFPSIAQQFKENRRDVRFWNCLNLDEHSRKAIGLNARINAMKSAYQHLSAPDQNYNNYSRKYRFYQDSRLFSRFTFHIIISDDGGYKSEKSSINIYMSALHLRPNSKHVCVIYDQRCSRYLNSRAENKRRLKIEVEVMGDTHPEWGAELEAFGVSVINTSAYHNFVQQINTSSGHNFIQHIGMSDPMHSLCLKSSCAYPSCGLDEDFD 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00372 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 88 230 IPR035897 -
Gma03g00372 1090 PRINTS Disease resistance protein signature 290 305 - -
Gma03g00372 1090 PRINTS Disease resistance protein signature 775 791 - -
Gma03g00372 1090 PRINTS Disease resistance protein signature 365 379 - -
Gma03g00372 1090 PRINTS Disease resistance protein signature 458 472 - -
Gma03g00372 1090 SMART till_3 91 228 IPR000157 GO:0007165
Gma03g00372 1090 Pfam TIR domain 91 251 IPR000157 GO:0007165
Gma03g00372 1090 Pfam NB-ARC domain 278 504 IPR002182 GO:0043531
Gma03g00372 1090 Gene3D Ribonuclease Inhibitor 798 1016 IPR032675 -
Gma03g00372 1090 SUPERFAMILY "Winged helix" DNA-binding domain 494 603 IPR036390 -
Gma03g00372 1090 Gene3D - 423 507 IPR042197 -
Gma03g00372 1090 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 89 938 - -
Gma03g00372 1090 SUPERFAMILY L domain-like 617 903 - -
Gma03g00372 1090 Pfam Leucine Rich Repeat 687 706 IPR011713 -
Gma03g00372 1090 Gene3D - 257 417 IPR027417 -
Gma03g00372 1090 ProSiteProfiles TIR domain profile. 90 254 IPR000157 GO:0007165
Gma03g00372 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 517 IPR027417 -
Gma03g00372 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 89 938 IPR044974 GO:0006952
Gma03g00372 1090 Gene3D Ribonuclease Inhibitor 616 797 IPR032675 -
Gma03g00372 1090 Gene3D - 89 256 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00372 Gma-Chr3 6207585 6216062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00372 78 935 WRKY Transcription Factor Family AT4G12020 31.507 5.44e-99 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00372 - - gmx:100779013 2024.59