LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma03g00367	ATGTGGCCCCTGTGGAGCTCTGGTATAAACAATGATGGAGCAGCAAAGGCAATGTCAAACGATATTCCTCGCATAAAGTATGATGTTTTTGTAAGCTTTAGGGGCTCGGACATCCGCCTCGGTTTTCTTAGCCATTTGAGTAAGGCTTTTCATCAAAAGCAAATACATGCCTTTGTTGACGATAAACTTCAGAGAGGAGATGAAATATCACAATCACTTCTAGAAGCAATTGAAGGATCATCTATTTCATTGATTATATTCTCTGAAGACTATGCTTCTTCACGTTGGTGTTTGGAAGAACTTGTGAAAATAGTTGAGTGCAGAGAAGAGTATGGACAGATTGTAATACCGGTATTTTACAATGTAGATCCTACTAATGTTCGGCATCAAAAGGGAAGTTTTGAAACAGCACTTGCTGAACATGAAAAAAAGTATGATTTGCCTATAGTGCGAATGTGGAGACGTGCTCTGAAAAATTCTGCTAATTTAGCAGGAATTAATTCAACAAATTTTCGGAATGATGCTGAGCTGCTTGAAGATATCATTGATCATGTGTTGAAGAGGTTGAATAAGAAGCCAATTAATAACTCAAAAGGACTTATTGGAATTGACAAACCGATTGCAGATTTAGAATCATTGTTACGTCAAGAGTCAAAAGATGTCCGCGTTATTGGAATTTGGGGTATGCATGGTATCGGCAAGACAACTATTGTAGAAGAATTATTTAACAAACAATGTTTTGAGTATGAAAGTTGTTGTTTTTTGGCAAAGGTAAACGAAGAATTAGAAAGGCATGGCGTAATTTGTGTAAAAGAAAAACTTATTTCTACACTATTAACAGAAGATGTGAAAATTAACACAACAAATGGGTTACCCAATGATATTTTGAGAAGGATTGGTCGTATGAAGATTTTTATTGTTCTTGATGATGTAAATGATTATGATCAAGTAGAAAAATTAGTTGGAACTCTTGATTGGCTTGGATCAGGTAGTAGAATAATTATAACAGCCAGAGACAGGCAAATTCTTCACAACAAAGTTGATGATATATATGAGATTGGTAGTTTGAGTATTGATGAAGCAGGTGAACTCTTTTGTCTGAATGCCTTTAACCAAAGTCATCTTGGAAAGGAGTACTGGGACTACTTGCTCCTCTCATATTGGATGGTCGATTATGCCAAAGGTGTTCCCTTAGTTCTTAAAGTTTTAGGTCAACTTCTTCGTGGAAAGGATAAGGAAGTATGGAAAAGTCAGCTGGACAAACTTCAAAAAATGCCAAACAAAAAAGTTCATGACATAATGAAACCAAGTTATTATGATCTAGATCGCAAAGAGAAAAATATTTTCTTAGATATTGCATGTTTCTTCAATGGATTGAATTTAAAAGTGGACTACCTAAACCTTTTATTAAGGGATCATGAAAATGACAATTCAGTAGCTATTGGGTTAGAAAGGCTGAAAGATAAATCTCTTATAACTATTTCTGAGGATAATACTGTATCAATGCACAATATTGTACAAGAAATGGGTCGAGAGATTGCTCATGAGGAGTCTAGTGAAGATCTTGGAAGTCGAAGCAGATTGTCGGATGCTGATGAGATTTATGAAGTACTGAACAATAACAAGGGAACAAGCGCCATTAGAAGTATAAGCATAGACTTGTCAAAAATTAGGAAGCTGAAGTTAGGCCCTCGCATATTTTCCAAGATGAGCAACCTACAATTTTTGGATTTTCATGGCAAATATAATCGAGATGACATGGATTTTCTTCCAGAAGGGCTTGAATATCTGCCAAGTAATATTAGATATCTTCGTTGGAAGCAATGCCCTCTAAGATCCCTGCCAGAAAAATTTTCAGCAAAGGATCTTGTTATATTGGACCTGTCAGATAGCTGTGTGCAAAAACTTTGGGATGGAATGCAGAATCTGGTGAATTTAAAAGAAGTCAGACTCTATAGGTGCCAATTCATGGAGGAGCTACCAGACTTTACAAAGGCAACAAATCTTGAAGTACTGAATCTCAGTTATTGTGATTTGAGTAGTGTTCATTCCTCTATTTTCTCTCTCAAAAAGCTTGAGAAATTGGAAATAACTTACTGTTTCAACCTTACAAGGCTCACAAGTGATCATATCCATTTAAGCTCCCTTCGTTATCTGAACCTTGAATTGTGTCATGGCCTAAAGGAACTCTCAGTTACATCAGAGAATATGATAGAACTAAATATGCGAGGCAGCTTTGGACTCAAAGCGTTGCCCTCATCTTTTGGACGTCAAAGCAAGCTAGAAATCCTAGTTATATATTTCAGTACCATTCAGAGTTTGCCTTCATCCATAAAAGACTGTACTAGACTGCGATGTCTAGACCTTCGTCATTGTGACTTTCTTCAAACTATACCAGAGCTTCCCCCATCGCTTGAAACTCTACTTGCTAATGAATGCAGATATCTGAGGACTGTATTGTTCCCTTCAACAGAAGTTGAACAATTGAAAGAAAACAGGAAAAAGATAGAGTTTTGGAACTGCTTGTGCTTGGATAAACATTCTCTCAGGGCTATTGAGTTGAATGTGCAAATCAACGTGATGAAATTTGCATGTCAGCATTTCCCAGCACCAGAACTTGATTTTGATGATTACAATGATTATGTAGTCATTGATGATCTCCAAAGTGGTTATGAAGAGTGTGATTCTTATCAAGCAACGTACGCGTACCCAGGAAGCACATTTCCTAAGTGGTTAGAGTATAAGACAACAAATGACTATGTGGTCATTGATCTCTCTTCTGCTCAACTTTCCCATCAGTTGGGTTTCATTTTCTGCTTCATTGTTCCCAAGGACTCAAAACGTGATGATAAATTGATACTTTACATTACTATCAGTGATTGTGAGGGTGAAGGCGAAAAAGGCAGCACGAAAATGTACATGAACAAGTCAGACTCAACAAAATCAGATCATGTGTGTGTGATGTACGACCAGCGATGCTCTCACTACCTAAATAGCATGGCCAAAAATATGAAAAGGTTTAAAATCAATGTTACAGCAAAGACAGGACCCATTAGTTTCAGTTGTGAAGAAGAGGAGGTGTTAAAAGGGTTTGGAGTCAGCCTAATAAACACCTCAACATATCACAATTTCATTCAACAAATGGAATATTCTTCGATTAAATGA	3165	0.3684	MWPLWSSGINNDGAAKAMSNDIPRIKYDVFVSFRGSDIRLGFLSHLSKAFHQKQIHAFVDDKLQRGDEISQSLLEAIEGSSISLIIFSEDYASSRWCLEELVKIVECREEYGQIVIPVFYNVDPTNVRHQKGSFETALAEHEKKYDLPIVRMWRRALKNSANLAGINSTNFRNDAELLEDIIDHVLKRLNKKPINNSKGLIGIDKPIADLESLLRQESKDVRVIGIWGMHGIGKTTIVEELFNKQCFEYESCCFLAKVNEELERHGVICVKEKLISTLLTEDVKINTTNGLPNDILRRIGRMKIFIVLDDVNDYDQVEKLVGTLDWLGSGSRIIITARDRQILHNKVDDIYEIGSLSIDEAGELFCLNAFNQSHLGKEYWDYLLLSYWMVDYAKGVPLVLKVLGQLLRGKDKEVWKSQLDKLQKMPNKKVHDIMKPSYYDLDRKEKNIFLDIACFFNGLNLKVDYLNLLLRDHENDNSVAIGLERLKDKSLITISEDNTVSMHNIVQEMGREIAHEESSEDLGSRSRLSDADEIYEVLNNNKGTSAIRSISIDLSKIRKLKLGPRIFSKMSNLQFLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCPLRSLPEKFSAKDLVILDLSDSCVQKLWDGMQNLVNLKEVRLYRCQFMEELPDFTKATNLEVLNLSYCDLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELCHGLKELSVTSENMIELNMRGSFGLKALPSSFGRQSKLEILVIYFSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPPSLETLLANECRYLRTVLFPSTEVEQLKENRKKIEFWNCLCLDKHSLRAIELNVQINVMKFACQHFPAPELDFDDYNDYVVIDDLQSGYEECDSYQATYAYPGSTFPKWLEYKTTNDYVVIDLSSAQLSHQLGFIFCFIVPKDSKRDDKLILYITISDCEGEGEKGSTKMYMNKSDSTKSDHVCVMYDQRCSHYLNSMAKNMKRFKINVTAKTGPISFSCEEEEVLKGFGVSLINTSTYHNFIQQMEYSSIK	1054

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma03g00367	1054	Gene3D	-	188	350	IPR027417	-
	Gma03g00367	1054	SUPERFAMILY	L domain-like	551	839	-	-
	Gma03g00367	1054	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	22	1051	-	-
	Gma03g00367	1054	PRINTS	Disease resistance protein signature	711	727	-	-
	Gma03g00367	1054	PRINTS	Disease resistance protein signature	223	238	-	-
	Gma03g00367	1054	PRINTS	Disease resistance protein signature	393	407	-	-
	Gma03g00367	1054	PRINTS	Disease resistance protein signature	298	312	-	-
	Gma03g00367	1054	Gene3D	-	24	187	IPR035897	-
	Gma03g00367	1054	SUPERFAMILY	"Winged helix" DNA-binding domain	428	537	IPR036390	-
	Gma03g00367	1054	Pfam	NB-ARC domain	211	434	IPR002182	GO:0043531
	Gma03g00367	1054	SUPERFAMILY	Toll/Interleukin receptor TIR domain	23	165	IPR035897	-
	Gma03g00367	1054	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	189	452	IPR027417	-
	Gma03g00367	1054	SMART	till_3	26	163	IPR000157	GO:0007165
	Gma03g00367	1054	Gene3D	Ribonuclease Inhibitor	462	695	IPR032675	-
	Gma03g00367	1054	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	22	1051	IPR044974	GO:0006952
	Gma03g00367	1054	Gene3D	Ribonuclease Inhibitor	712	853	IPR032675	-
	Gma03g00367	1054	Pfam	TIR domain	26	198	IPR000157	GO:0007165
	Gma03g00367	1054	ProSiteProfiles	TIR domain profile.	25	189	IPR000157	GO:0007165
	Gma03g00367	1054	Gene3D	-	355	442	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma03g00367	Gma-Chr3	6099019	6109891	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma03g00367	13	800	WRKY Transcription Factor Family	AT4G12020	34.119	3.16e-104	358

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma03g00367	-		-	aprc:113850949	1357.04