Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00344 ATGTCTTTCAGTTTCACTGACCTTCTTTCTACTAACAACAACAATAGCTTGAACATGGATGATGATCCCTTTGGACTTGAATTTGCTAATAATTTCAAGTCAGCTTCACTGCCTCTCTCTCCTTCTTCAATCTACCCTTCTTCTTATGCTGAGTTCCCTCCTGGTTTTGTCCCAACTTCACAGTCATTGAATTCACACCACTTTTTTTCTTCTCAAATTGTTCCTGCATCTTACACAACTGAGCAATCTTCTAGCATGAGCTACAACATGAGAAACACTTCAACTGAGGGTCAACAAGGAAACAAGGAGGAAGAGAGAAACTACTCTGACCTCTCTTTCCTAACAAAAACAAACCACGTGCCTCTCTTTCAATCTTCCACAACCATGTTTCAAGTGGAGCCACTAAAGAAACAGGACACAATGATATCCAGTGAAGCTGCAAAGCAAACAGATTTCTCATCTGAGAGGACAGAAACAAAACCTGAATATCCATCTACTCAGGGCTTCTCAGCAGCATTAGCCTCAACCAAACCTGAAATACAAAGCAATTCTGCTCCTGGTTCTGTTCATTTTAACTCCACTTATGCTCCTAAGTCTATTAGGGAACAAAAGAGATCAGAAGATGGTTACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGCGAAAATCCGCGTAGTTATTACAAGTGCACGCACCCGAGTTGTCCAACAAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACATATCACTGAAATAGTATACAAGGGAAGCCACAATCATCCCAAGCCACTTGGTAGAAAAAATGGTTCTCAATCAATTCATCAAACTTCTTCGTCCTGCACTAACTCAGGGATTTCTGATCAATCTGTGGGAGAGGAAGATCTTGAGCAAACATCACAGACTAGTTATTCTGGAGGGGGTGATGATGACCTTGGAAATGAGGCCAAAAGATGGAAGGGGGAGAATGAAAATGATGGCCATTCCTATTCTTCTGCTGGGAGTAGAACTGTTAAGGAACCTAGAGTTGTAGTTCAAACCACAAGTGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGTTACTACAAATGTGTAGCCCCAGGTTGTCCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATGAAAGCTGTGATTACAACTTATGAAGGGAAACATATCCATGATGTACCTTTAGGACGAGGAAACTCAAGCTATAGCATGAACAGAACTTCTCTAAACAACAACACCAACACCAGCACCAGCAATGTAACAGCTCCTGCCCCTATTAGGCCCTCAGCAGTGACTAATTATTCTAACTCAGCAAGTTTCACAAACTCACTTCATGACACAAAGCCACCAACATCTGCAAGCCAAGAACCTTTTCCAATGGACGTGTTGCTGAGCCCCGGAAGTATCGGATTTGCGGCTAATGACCTGTTCCTTCAGTCTTTTTTGTCAAAGAACTTTTAA 1524 0.416 MSFSFTDLLSTNNNNSLNMDDDPFGLEFANNFKSASLPLSPSSIYPSSYAEFPPGFVPTSQSLNSHHFFSSQIVPASYTTEQSSSMSYNMRNTSTEGQQGNKEEERNYSDLSFLTKTNHVPLFQSSTTMFQVEPLKKQDTMISSEAAKQTDFSSERTETKPEYPSTQGFSAALASTKPEIQSNSAPGSVHFNSTYAPKSIREQKRSEDGYNWRKYGEKQVKGSENPRSYYKCTHPSCPTKKKVERSLEGHITEIVYKGSHNHPKPLGRKNGSQSIHQTSSSCTNSGISDQSVGEEDLEQTSQTSYSGGGDDDLGNEAKRWKGENENDGHSYSSAGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVAPGCPVRKHVERAAHDMKAVITTYEGKHIHDVPLGRGNSSYSMNRTSLNNNTNTSTSNVTAPAPIRPSAVTNYSNSASFTNSLHDTKPPTSASQEPFPMDVLLSPGSIGFAANDLFLQSFLSKNF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00344 507 MobiDBLite consensus disorder prediction 179 199 - -
Gma03g00344 507 MobiDBLite consensus disorder prediction 84 105 - -
Gma03g00344 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 505 IPR044810 GO:0003700
Gma03g00344 507 SUPERFAMILY WRKY DNA-binding domain 202 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 ProSiteProfiles WRKY domain profile. 201 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 MobiDBLite consensus disorder prediction 327 342 - -
Gma03g00344 507 MobiDBLite consensus disorder prediction 179 207 - -
Gma03g00344 507 Pfam WRKY DNA -binding domain 356 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 Pfam WRKY DNA -binding domain 207 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 ProSiteProfiles WRKY domain profile. 350 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 MobiDBLite consensus disorder prediction 266 309 - -
Gma03g00344 507 MobiDBLite consensus disorder prediction 312 326 - -
Gma03g00344 507 SMART WRKY_cls 206 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 SMART WRKY_cls 355 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 MobiDBLite consensus disorder prediction 143 167 - -
Gma03g00344 507 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 13 505 - -
Gma03g00344 507 MobiDBLite consensus disorder prediction 255 342 - -
Gma03g00344 507 SUPERFAMILY WRKY DNA-binding domain 347 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 Gene3D WRKY domain 342 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g00344 507 Gene3D WRKY domain 192 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00344 Gma-Chr3 5411522 5414532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00344 201 493 WRKY Transcription Factor Family AT2G38470 52.424 5.69e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g00344 WRKY 5.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00344 K13424 - gmx:102666898 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00344 03 5411522 5414532 Gma03g00344 03 5411522 5414532 ECH