Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00304 ATGAAGGCCAAGTGGATCGCCCTCCAGCACAAGGTCCCGAAGGAACACGCCGCATCGTCATCTGACAACACACAAAAATTGGTGCACTGGAGCCCCGAATTGGTTACCGAATCCACCTTCACCTCTTCCCCTCACAAACCGCGCTCCAATCCATACTTTTCCTCTTCTTCTTCCTTCTCCCAACCTCCCACAACGTTCATGGTCAAAGTGAAGTATGGCTCATCCTATCACCAAATTCAAATCAGTTCTCATGCAAGTTTTGGGGAATTGAAGAAAATGTTAACAGAACCTACAGGATTGCACGTTCAGGATCGGAAATTGATTTACAAGAAAAAAGAGAGGGATTCAAAGTCATATCTTGATGTTGAGAGGGTCAAAGATGGATCAAAATTGGTGCTGCTTGTGGACATTGAGAGTAGAAAAAGAAGGTTACTTGAGATGTTAAAAATTGCTAAGAAGGAGAAGACATTAAAATCCTTGACAGAAATAAAGGTGGAGGTTGATAAACTTGCCAAGAAGCGCGAGAAGTGCAAGGCGATCAACGGCGACGACCTGCTCTGGGCGATGACCACTCTGGGCTTCGAGGACTACGTGGAGCTTCTCAAAGGCTACCTCTAG 618 0.4563 MKAKWIALQHKVPKEHAASSSDNTQKLVHWSPELVTESTFTSSPHKPRSNPYFSSSSSFSQPPTTFMVKVKYGSSYHQIQISSHASFGELKKMLTEPTGLHVQDRKLIYKKKERDSKSYLDVERVKDGSKLVLLVDIESRKRRLLEMLKIAKKEKTLKSLTEIKVEVDKLAKKREKCKAINGDDLLWAMTTLGFEDYVELLKGYL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00304 205 SUPERFAMILY Histone-fold 174 205 IPR009072 GO:0046982
Gma03g00304 205 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR-LIKE PROTEIN 11 179 - -
Gma03g00304 205 Gene3D - 65 134 - -
Gma03g00304 205 SUPERFAMILY Ubiquitin-like 51 138 IPR029071 -
Gma03g00304 205 Coils Coil 134 154 - -
Gma03g00304 205 ProSiteProfiles Ubiquitin domain profile. 64 140 IPR000626 GO:0005515
Gma03g00304 205 Gene3D Histone, subunit A 160 205 IPR009072 GO:0046982
Gma03g00304 205 PANTHER BCL2-ASSOCIATED ATHANOGENE 11 179 IPR039773 GO:0051087
Gma03g00304 205 MobiDBLite consensus disorder prediction 38 57 - -
Gma03g00304 205 PRINTS CCAAT-binding transcription factor subunit A signature 172 190 - -
Gma03g00304 205 PRINTS CCAAT-binding transcription factor subunit A signature 191 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00304 Gma-Chr3 4530226 4535141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00304 173 205 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.848 2.45e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00304 - - gmx:100792005 199.904