LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma03g00296	ATGAGTTACAGAGAAAGGAACAAAGGGAAGGGAGAAGAGAAGGAATATGAGAACAGTACTACTGTGGGATTGGATTCAAAATCAGTGAGTCACAACAATGGTTCAATAGAAGAGGAGCTGCTAACAATTGATGAGAATCTTctgattgaccccaaactgttgtttattgggtcaaaaattggagagggagctcatgggagggtttatgaaggaagGTATAGAGATCGGATTGTTGCGATTAAAGTTCTGCATCGTGGGGGTACGTTGGAAGAAAAAGTTGCCCTTGAGAATCGTTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCACCATGAGAATCTGGTGAAGTTTATTGGAGCTTGTAAGGCTCCTCTCATGGTGATTGTTACAGAGATGTTACCTGGGTTGTCCCTGCGAAAATATCTAACCACCATACGCCCTAAGCAATTGGACCCTTATGTGGCTATAAAGTTTTCCCTTGATGTTGCTCGAGCCATGGATTGGTTACATGCCAATGGGATCATACATAGAGATCTGAAACCTGACAATCTGCTTCTCACAGAAAACCAGAAGTCAGTTAAACTTGCTGATTTTGGTCTGGCAAGAGAAGAATCTGTGActgaaatgatgacggcagagactggaacttaccgttggatggcacctgagTTGTACAGTACCGTGACATTGCGTCAAGGTGAGAAAAAGCATTACAACAATAAGGTTGATGTCTATAGCTTTGGAATTGTGTTGTGGGAGCTACTTACAAACCGCATGCCTTTTGAAGGGATGTCGAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAACCTTCCTGATGATATTTCTCCTGATCTTGCCTTTATCATACAATCATGCTGGGTTGAAGATCCTAACATGAGACCAAGCTTCAGTCAGATTATTCGCTTACTCAATGAGTTTCTCTTCACACTCCAACAACCATCCCCTTCGTTGCCGCCAGAACCTGAGAACAAACCTGAGGCCGTAACAAGTAACGAAGGGGCTGCATCAGGTATCAAGAAGGAGAATGTTTTCAAAAGCTATTTGGAGCTACAAGATTTTGGTCAGCAGGCTGGAAATGCTAATTTACAAGATATAGGTTCTTCATTGGAGATTCAAAATTCAGTAGAGGAATCTAATGTAAGTTGTCCTGCAGTTGATGAAAATGAACAAGAGAGCATTGCAATATCTAAAAGTGGTGATGAGTTATCACCTCATAGTGGTTCTACTTCTTCTAATGGCCATAGATCTCTGAAATCAGAGTTGGAAATTCAAGAGGTTGAGAAAAATGCATCAAGAAAAACTGAAACTGCTTCTGGCTCTCATTCTGTTACTACTGATACTGAACATAATGACGAACATGTTGACAAGTCAGTATCAAATGATGAGTTAGATAAGAGTCAACAACCCCCTGCACTCAAAGATGTTAGGGCTACAAGTGAGGTGGTGAAGCCTCAAACAGAAACTTCAAATAAAGGGGATCAAAGCCATTTGGGTTTGGGTAAGACCAGTGTTGCAAATGATTTGCACTTGGATTCTGCAATTATTCAATATTAA	1590	0.3767	MSYRERNKGKGEEKEYENSTTVGLDSKSVSHNNGSIEEELLTIDENLLIDPKLLFIGSKIGEGAHGRVYEGRYRDRIVAIKVLHRGGTLEEKVALENRFAREVNMMSRVHHENLVKFIGACKAPLMVIVTEMLPGLSLRKYLTTIRPKQLDPYVAIKFSLDVARAMDWLHANGIIHRDLKPDNLLLTENQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPNLPDDISPDLAFIIQSCWVEDPNMRPSFSQIIRLLNEFLFTLQQPSPSLPPEPENKPEAVTSNEGAASGIKKENVFKSYLELQDFGQQAGNANLQDIGSSLEIQNSVEESNVSCPAVDENEQESIAISKSGDELSPHSGSTSSNGHRSLKSELEIQEVEKNASRKTETASGSHSVTTDTEHNDEHVDKSVSNDELDKSQQPPALKDVRATSEVVKPQTETSNKGDQSHLGLGKTSVANDLHLDSAIIQY	529

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma03g00296	529	CDD	STKc_MAP3K-like	60	315	-	-
Gma03g00296	529	MobiDBLite	consensus disorder prediction	430	446	-	-
Gma03g00296	529	SMART	serkin_6	54	319	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma03g00296	529	MobiDBLite	consensus disorder prediction	409	429	-	-
Gma03g00296	529	ProSiteProfiles	Protein kinase domain profile.	54	319	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma03g00296	529	MobiDBLite	consensus disorder prediction	457	474	-	-
Gma03g00296	529	MobiDBLite	consensus disorder prediction	1	30	-	-
Gma03g00296	529	MobiDBLite	consensus disorder prediction	493	513	-	-
Gma03g00296	529	MobiDBLite	consensus disorder prediction	1	20	-	-
Gma03g00296	529	PANTHER	SERINE-THREONINE PROTEIN KINASE	25	339	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma03g00296	Gma-Chr3	4248412	4258790	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma03g00296	42	318	MAP Kinase Kinase Kinase	AT5G01850	76.744	9.06e-170	482

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Gma03g00296		PK_Tyr_Ser-Thr	1.5e-59	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma03g00296	-		-	gmx:100799533	663.685

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma03g00296	03	4248412	4258790	Gma03g00296	03	4248412	4258790	ECH

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