Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00284 ATGAGCCAGCGTGTCCCCAACTGCGATGTGGACGACAATAACAACATTCCCACAACCACAAAAATCCCTCTTCTTCCCAATTTCAATTTCATATCCCATGAAGTTCCTATGTTGGGCTACCAAGCTGCTGAACTACCATGCAAAAAGGGACAACCTTCGACGTACAAAGGCAGCCACGGAAACCTAACTAGTACGTGGGACAAACCTCGTACAAGTGGTGGTACCTTGGAGTCCATAGTTAGCCAACATGTCAGCGAAAACCGCTACAAGTTGGTTACTATGGACGCCTTAGTGCCCTGTTCAGAACAACAGGGTACACGGAAGGCAGTGGTGTCAGAAAGGCTTGACGTGTGTGGGAAGAGTCGCTTCCCACGCGTGGTGGCGCAGGAGGAAGTGGAGAAACGGGCTGGGGTGGTGGCGCGTGGGGCGCGTGGTACTACAACGCTAGAATTGGGTGGCTGCAAGGATTGGAGTGTGAGTGGTAGTGAAACTTGTCGTAGGGAGTTGAGTGTGACCTTCAATTCTGCCACCAAGGGTTCGCCGGAAAACACCACTAGCTCTGGCAAACAGTGCACCGGGACCACCACCAACGACGACCGTGATTCCATTAGCCACCGTATATCGCAGGGTGAGGTACCGGATGAGGATTACAAGGCAACAAAAGTTGATAGATCTTCTGGGTCCAACAAAAGAATCAAAGCTAATTCAGTAGTGCACAAACAATCTGAACGGAGAAGAAGAGATAAGATCAACCAAAGAATGAAGGAATTGCAAAAGCTGGTCCCAAATTCCAGTAAGACTGATAAAGCTTCGATGCTAGATGAGGTGATCCAATATATGAAGCAATTGCAAGCGCAAGTGCAAATGATGAATTGGATGAAAATGTACACCTCCATGATGCTGCCAATAACCATGCAGCAGCAGCAACAACAACAACTTAAAATGTCTATGATGATGGCTCAGATGGGCATGGGCATGGGAATGAGTAAGGATATGGTTATGAATATGAACAGCATGAACATTCCTGGATTCCCCCCTATGCTTCCCTTCCCCTCCTTCATGCCTATGGCCCCATGTGGCGATCAATTACAAGGAACACCAGAGAAGTCCGTGACCATGGATGCATACTGTAAGATGGCTTCCCTGTATCAGCAGCTATTTCATCCTCCAGCTTCTAGCTCAAAGAACTGA 1191 0.4819 MSQRVPNCDVDDNNNIPTTTKIPLLPNFNFISHEVPMLGYQAAELPCKKGQPSTYKGSHGNLTSTWDKPRTSGGTLESIVSQHVSENRYKLVTMDALVPCSEQQGTRKAVVSERLDVCGKSRFPRVVAQEEVEKRAGVVARGARGTTTLELGGCKDWSVSGSETCRRELSVTFNSATKGSPENTTSSGKQCTGTTTNDDRDSISHRISQGEVPDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMMNWMKMYTSMMLPITMQQQQQQQLKMSMMMAQMGMGMGMSKDMVMNMNSMNIPGFPPMLPFPSFMPMAPCGDQLQGTPEKSVTMDAYCKMASLYQQLFHPPASSSKN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00284 396 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 396 IPR031066 -
Gma03g00284 396 MobiDBLite consensus disorder prediction 199 228 - -
Gma03g00284 396 PANTHER TRANSCRIPTION FACTOR UNE10-LIKE 40 396 - -
Gma03g00284 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
Gma03g00284 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 307 IPR036638 GO:0046983
Gma03g00284 396 SMART finulus 240 289 IPR011598 GO:0046983
Gma03g00284 396 Coils Coil 240 260 - -
Gma03g00284 396 MobiDBLite consensus disorder prediction 173 198 - -
Gma03g00284 396 CDD bHLH_AtPIF_like 238 297 - -
Gma03g00284 396 Gene3D - 229 295 IPR036638 GO:0046983
Gma03g00284 396 MobiDBLite consensus disorder prediction 173 248 - -
Gma03g00284 396 Pfam Helix-loop-helix DNA-binding domain 238 284 IPR011598 GO:0046983
Gma03g00284 396 MobiDBLite consensus disorder prediction 54 73 - -
Gma03g00284 396 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00284 Gma-Chr3 4104527 4108348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00284 1 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 39.937 8.95e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma03g00284 HLH 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00284 - - gmx:100788617 723.776