Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00251 ATGTCCTCCTCATCCACTTCCTTTTCACCGGACCAACAACACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGCTTGTTCAAGAATGTCACTGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGTCAACATGCGTGGACTGCTTCTTCCCAGTGCCAATCAGCTTCACCTTGGCCACACTTTCTTCACTCCTCAAAATCTTATGGAGGAGATTCGTAATGCACCTTCAACAAACATAATGATGAATCAGCTGCCGAACCCTAATGATTTGGTCATGAGCACCATGAGAGGAGGGCCTGAAGAAACCCCTAAGCCTCCATCAGCTAATAGACCTCCAGAGAAGAGACAGCGAGTTCCGTCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTCATGCCTGATAATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAAGCAGAGGACGTGCTTATGAAAGATGGGTTTTTCGCACCGGCTAATGTAGGCGTCTCTCCCTACTAG 651 0.4854 MSSSSTSFSPDQQHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCGHCTNLLSVNMRGLLLPSANQLHLGHTFFTPQNLMEEIRNAPSTNIMMNQLPNPNDLVMSTMRGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDNQPVKKANVRQEAEDVLMKDGFFAPANVGVSPY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00251 216 MobiDBLite consensus disorder prediction 109 134 - -
Gma03g00251 216 PANTHER PROTEIN YABBY 4 1 214 - -
Gma03g00251 216 Gene3D High mobility group box domain 117 198 IPR036910 -
Gma03g00251 216 PANTHER PROTEIN YABBY 6-RELATED 1 214 IPR006780 GO:0007275
Gma03g00251 216 Pfam YABBY protein 17 180 IPR006780 GO:0007275
Gma03g00251 216 SUPERFAMILY HMG-box 121 173 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00251 Gma-Chr3 3389482 3392510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00251 28 214 C2C2-YABBY Transcription Factor Family AT4G00180 62.381 1.98e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma03g00251 YABBY 2.5e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00251 K25796 - gmx:100794423 448.743