Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00249 ATGCAATTCAGACTCGGCAAGCGCGTTGTAAGGGTTGCTAAATGTGTCTTCCGTCGGATCAGGGTCAGAACCCGACCCGGATACTACCACCGTCTCGGTGGTTCGACGACCCATTCTAAGAATCCCATAACAACAAGGCTTCTCACGTGGGGGCAAAAACTGAAGAGAGGAGCGAAGACCTTATGTGGGAAAAATGGGTCGGGTTACCTTCCAATAGGGTCGGATCCGCTTTGTGACAGGGCTCCGGCGGTGCCGAAGGGGCACTTGGCGGTGTACGTTGGGGAGGAGGACGGCGGTTTCCGGCGCGTATTGATTCCGGTGATCTACTGTAACCACCCTCTGTTCAGCGATTTGCTGAGGGAAGCGGAAAAAGAGTTCGGGTTTGAACACCCCGGTGGGATCACGATACCGTGCCGACTTACCGAGTTTGAACGGGTTAAGACCCGTATCGCGTCCGGGTCGGGTCAACGCGGGAGGACCCGGAGATTGGGTTGGCCGCTACAACATTATTGA 513 0.5575 MQFRLGKRVVRVAKCVFRRIRVRTRPGYYHRLGGSTTHSKNPITTRLLTWGQKLKRGAKTLCGKNGSGYLPIGSDPLCDRAPAVPKGHLAVYVGEEDGGFRRVLIPVIYCNHPLFSDLLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGQRGRTRRLGWPLQHY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00249 170 PANTHER SMALL AUXIN-UP RNA-RELATED 3 160 - -
Gma03g00249 170 MobiDBLite consensus disorder prediction 151 170 - -
Gma03g00249 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 160 IPR003676 GO:0009733
Gma03g00249 170 Pfam Auxin responsive protein 79 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00249 Gma-Chr3 3346664 3348083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00249 82 143 Calmodulin-binding Proteins AT3G43120 53.226 1.88e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00249 K14488 - gmx:100796005 358.992