Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00246 ATGCATTGTGAAATCAAGGGTGGTCACTCTGTGCTGTGCACGTGTGCAACTGCCTCAGATTTGAGACCGGTTCAAAACCCAGTTAGGACTTATCTTGGAAGACCATGGAAGCAATATTCAAGAACAGTTTTAATGAAGACTTATCTAGATGGCTTTATTAATCCTCAGGGTTGGATGGAATGGAGTGGTAACTTTGCATTGAACACACTTTATTATGGAGAGTACATGAACAATGGTCCTGGTTCTTCTACTGCTAGACGTGTTAAATGGCCAGGTTATCGTGTCATACCTAGGGCATCCTAA 303 0.4224 MHCEIKGGHSVLCTCATASDLRPVQNPVRTYLGRPWKQYSRTVLMKTYLDGFINPQGWMEWSGNFALNTLYYGEYMNNGPGSSTARRVKWPGYRVIPRAS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00246 100 PANTHER PECTINESTERASE 17 99 - -
Gma03g00246 100 Pfam Pectinesterase 12 96 IPR000070 GO:0030599|GO:0042545
Gma03g00246 100 Gene3D - 6 100 IPR012334 -
Gma03g00246 100 PANTHER PECTINESTERASE 17 99 - -
Gma03g00246 100 SUPERFAMILY Pectin lyase-like 14 95 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00246 Gma-Chr3 3296641 3297432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00246 18 100 Carbohydrate Esterase AT2G45220 66.265 8.55e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00246 K01051 - gmx:100793904 162.54