Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00245 ATGATAGCCTTTCGCTTATTCCTAGCACTATCAGTTCCTTTCTTTCTCTCTTCTTTCGTTTCTAGTTATTCTTGGAATGACGTTAAACTTTGGTGTAGCCAAACCCCAAACCCTGAACCATGTGAGTATTTCCTGAGCAATAACCCCACTCACCAATACAAACCCATCAAGCAAAAATCCGATTTTTTCAAACTTTCATTGCAACTTGCTCTAGAACGTGCCCTAAATGGCCATGCAAACACTCTTTCACTTGGTTCAAAATGCCGTAACCCACGTGAAACCGCTGCTTGGGCTGATTGTGTTGAGCTTTATGAACAAACCATTCGTAAACTCAACAAAACCCTAGACCCTAGCACCAAGTTCTCCCAAGTTGATACCCAAACATGGCTCAGCACAGCTCTCACTAACCTTGAGACATGCAAAGCCGGGTTCTATGAGCTTGGTGTTCAAGACTATGTTCTACCTCTGATGTCTAACAATGTTACCAAGTTGTTGAGCAACACCTTGGCACTTAACAAGGTTGAATATGAAGAACCAAGTTACAAAGATGGGTTCCCAACATGGGTGAAGCCAGGTGATAGAAGGCTGTTGCAAGCTTCTTCTCCAGCTTCTAAGGCTAATGTAGTTGTGGCAAAAGATGGCTCTGGAAAGTACACAACAGTGAGTGAAGCTGTAAATGCTGCACCCAAGAGTAACAGTGGAAGGTATGTGATATATGTGAAGGGAGGGATATACGATGAACAAGTTGAGATCAAAGCAAATAACATAATGTTGGTGGGAGATGGTATTGGGAAGACCATAATCACAAGTAGCAAAAGCGTTGGAGGGGGCACCACAACCTTCCGTTCAGCCACTGTTGATGTATCAGGGGATGGATTCTGGGCCAGAGACATGACATTTGAGAACAGTGCTGGCCCAGAGAAGCACCAAGCAGTGGCACTCAAGGTAAGTTCAGACTTATCAGTGTTCTACAGGTGCAGCTTCAGAGCCTACCAAGACACTCTCTACGTGCACTCAAATCGTCAATTCTACCGCGACTGCTATGTATACGGCACCATTGATTTCATCTTTGGGGATGCAACAGTGGTGCTGCAGAACTGTGACATCTTTGTGAGGAAGCCAATGAGCCACCAATCCAACTTCATCACAGCACAAGGAAGAGATGACCCCAACAAGAACACAGGAATTTCAATCCAAAGCTGCAGGGTTAGGCCAGATTCTGAGTTTCTCACACTCAAGGAATCTTTCAAGACATTTCTTGGTAGGCCTTGGAGGAAGTACTCAAGGACTGTGTTTCTGAAAACTGATTTGGATGGTTTGGTTCACCCTAGAGGGTGGGGTGAATGGAGTGGAGAATTTGCACTCTCAACTTTGTACTATGGAGAGTACTTGAACACAGGTTATGGTGCCTCTACACAGAATAGGGTGAATTGGCCTGGTTTTCATGTGCTGAGGAGTGCTAGTGAGGCCACACCCTTCACTGTGAACCAGTTTCTGCAAGGGGAAAGGTGGATTCCTGCTACAGGGGTGCCATTCTCTTCTGGAATTTAA 1551 0.4513 MIAFRLFLALSVPFFLSSFVSSYSWNDVKLWCSQTPNPEPCEYFLSNNPTHQYKPIKQKSDFFKLSLQLALERALNGHANTLSLGSKCRNPRETAAWADCVELYEQTIRKLNKTLDPSTKFSQVDTQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYEEPSYKDGFPTWVKPGDRRLLQASSPASKANVVVAKDGSGKYTTVSEAVNAAPKSNSGRYVIYVKGGIYDEQVEIKANNIMLVGDGIGKTIITSSKSVGGGTTTFRSATVDVSGDGFWARDMTFENSAGPEKHQAVALKVSSDLSVFYRCSFRAYQDTLYVHSNRQFYRDCYVYGTIDFIFGDATVVLQNCDIFVRKPMSHQSNFITAQGRDDPNKNTGISIQSCRVRPDSEFLTLKESFKTFLGRPWRKYSRTVFLKTDLDGLVHPRGWGEWSGEFALSTLYYGEYLNTGYGASTQNRVNWPGFHVLRSASEATPFTVNQFLQGERWIPATGVPFSSGI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00245 516 Pfam Pectinesterase 207 502 IPR000070 GO:0030599|GO:0042545
Gma03g00245 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 174 IPR035513 -
Gma03g00245 516 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Gma03g00245 516 CDD PMEI-like_3 30 173 - -
Gma03g00245 516 SMART PMEI_2 23 171 IPR006501 GO:0004857
Gma03g00245 516 Pfam Plant invertase/pectin methylesterase inhibitor 28 171 IPR006501 GO:0004857
Gma03g00245 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 174 IPR035513 -
Gma03g00245 516 PANTHER PECTINESTERASE 9 515 - -
Gma03g00245 516 PANTHER PECTINESTERASE 9 515 - -
Gma03g00245 516 SUPERFAMILY Pectin lyase-like 201 515 IPR011050 -
Gma03g00245 516 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Gma03g00245 516 Gene3D - 202 516 IPR012334 -
Gma03g00245 516 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00245 Gma-Chr3 3246628 3286223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00245 1 516 Carbohydrate Esterase AT2G45220 62.428 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00245 K01051 - gmx:100781697 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00245 03 3246628 3286223 Gma03g00245 03 3246628 3286223 ECH