Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00228 ATGAATCAATCGAGCATGGCAAACTGTGTTTGCAGTTTATTAATTATGGCCCTTTATATCATGTTGCTACCATCCGTTATTGTTACCAGCATGACACATTCTTCTAATTCCTCAACCATAAATGAGGAACGACAGGCTTTGCTCCAAAGCGGTTGGTGGAATGATTACCTAAATATCTCAGACCATTGTGCTTGGGAGGGTATCACTTGTAATGAAGCTGGAAGTGTTACTTCGATTATGAGAATAGGTTGGAAGATTCCTCCATCTGAAGAATTGCGGCAGCTTCAGAACTTGAACATGACTGCCTTCCCCAATTTAGAGGTTCTAGATCTATATGGAATGAGTCTTAGGGGAAGCATCCCTAAAGAAATAAGCACACTTACAAAGCTTACCGGTCTTTACCTAACCCATAATCATCTTCAAGGTTCAATACCAGTAGAACTAGGGAATTTGACACAACTATTGCAGTTGTCTCTTTATAATAATTCGCTAACGGGTTCAATCCCTTCTACTTTGAGTCAATTGGTCAATTTGAGATATCTCCTTCTATCTTTCAACCAACTTGAAGGTGCCATACCAGCAGAACTGGGGAATTTAACACAACTGATTGGATTTTATCTCTCCAACAATTCAATCACCGGTTCAATCCCTTCTAGTTTGGGTCAATTACAGAATTTGACTATTCTCCTTCTTGATTCTAATCGTATTCAAGGTCCCATACCAGAAGAATTTGGAAATTTAAAATCTCTACATATATTATATCTGTCAAACAATTTACTCACCAGTACAATTCCCCCTACATTGGGTCGATTGGAGAATTTGGCACACCTCTTCCTTGATTCTAACCAAATAGAAGGTCACATACCCCTAGAGCTAGCGAATTTGTCCAATTTAGACACTTTACATCTTTCACAAAACAAGATCTCCGGTTTAATACCTCCAAAACTATTTCAAATGGGCAAAATGCATTCTTTATATCTCTCATCAAATCTGTTAAGTGGCTCAATCCCAATAGAGAATCTGAAATGTCCCTCTATTGCAACAGTTGATTTAAGTTACAACTTGTTAAATGGAAGCATACCTTCTCAAATTGGTTGTGTCAATAACCTTGACCTTAGCCACAATTTTCTTAAAGGTGAGGTTCCATCTCTTTTGGGAAAGAATTCCATACTAGATAGGTTGGATCTTAGTTATAATAATCTCACAGGTAAACTGTACAAGGAACTTGCTACTCTAACATATATAAACCTTTCATACAATTCTTTTGACTTTTCACAAGACCTTGACTTGAAGGCACACATACCAGATTATTGTTCTTTCCCAAGAAACTCACTAATCAGTCACAACCCACCAAATTTTACATCTTGTGATCCTTCTCCCCAAACAAACTCTCCAACTAGTAAAGCTAAGCCTATCACTCTAATTGTTATTCCTATCATCGGTATAATTCTTTGGGTAATTCTTTTAGCATTATATTTCGCAAGATGCTTTTCTAAAACCAAATTTGAAGGAGGATTAGCAaagaatggagacttgttttctgtatggaactatgatggcaaagttgcatttgaagacatcattgaagcaactgaagactttcacatcaagtactgcattgggactggtgcatatggaagtgtctatagagttcaattgccgactggcaaaattgttgcagtgaagaaacttcaccaaatggaagctcaaaatccatcttttgacaaaagtttccgcaatgaggtcaagatgctaaccgaaatatgtcatagaaacattgtaaagcttcatggtttttgcctacataatcgttgtatgtttctagtctatcaatacatggaaagtggtagcttattttatgccttgaataatgatgtggaagctaaggagatgaattggagcaagagggtgaacatcattaaaggaatggcagatgctttgtcctacatgcatcatgattgtacaccacccattattcatcgagatgtaacaagtagcaatgttttattgaactcacacttgcaggcttttgtctcagactttggcacagctagactccttgatcctgattcttcaaatcaaacattagtagttggcacatacggatatattgccccagagcttgcttacacattgactgtatcagaaaaatgtgatgtttttagttttggggttgtggcattagaaacattaatgggaagacatccaggagaGTTCATCTCGTCTTTATCAAATTCATCAACTCAAAACATATTACTGAAGGACCTCTTGGATGCACGTCTTCCTCTTCCTGTTTTTCCAAAAGATGCTCAAGATATAATGCTTGTGGTAGCACTAGCATTGGCTTGCTTGTGTTCCCAACCAAAGTCTAGACCATCAATGCAACAAGTGGCTCAAGAACTTTGTGCTTCCAAACTACCCCCACCTCTGCCTTTCTATAAAATTTCAATTGCTCAGTTGATGACTCCAGATACATTATTGTCTTTCATTTGA 2493 0.2712 MNQSSMANCVCSLLIMALYIMLLPSVIVTSMTHSSNSSTINEERQALLQSGWWNDYLNISDHCAWEGITCNEAGSVTSIMRIGWKIPPSEELRQLQNLNMTAFPNLEVLDLYGMSLRGSIPKEISTLTKLTGLYLTHNHLQGSIPVELGNLTQLLQLSLYNNSLTGSIPSTLSQLVNLRYLLLSFNQLEGAIPAELGNLTQLIGFYLSNNSITGSIPSSLGQLQNLTILLLDSNRIQGPIPEEFGNLKSLHILYLSNNLLTSTIPPTLGRLENLAHLFLDSNQIEGHIPLELANLSNLDTLHLSQNKISGLIPPKLFQMGKMHSLYLSSNLLSGSIPIENLKCPSIATVDLSYNLLNGSIPSQIGCVNNLDLSHNFLKGEVPSLLGKNSILDRLDLSYNNLTGKLYKELATLTYINLSYNSFDFSQDLDLKAHIPDYCSFPRNSLISHNPPNFTSCDPSPQTNSPTSKAKPITLIVIPIIGIILWVILLALYFARCFSKTKFEGGLAKNGDLFSVWNYDGKVAFEDIIEATEDFHIKYCIGTGAYGSVYRVQLPTGKIVAVKKLHQMEAQNPSFDKSFRNEVKMLTEICHRNIVKLHGFCLHNRCMFLVYQYMESGSLFYALNNDVEAKEMNWSKRVNIIKGMADALSYMHHDCTPPIIHRDVTSSNVLLNSHLQAFVSDFGTARLLDPDSSNQTLVVGTYGYIAPELAYTLTVSEKCDVFSFGVVALETLMGRHPGEFISSLSNSSTQNILLKDLLDARLPLPVFPKDAQDIMLVVALALACLCSQPKSRPSMQQVAQELCASKLPPPLPFYKISIAQLMTPDTLLSFI 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00228 830 Gene3D Ribonuclease Inhibitor 205 452 IPR032675 -
Gma03g00228 830 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 207 822 - -
Gma03g00228 830 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 280 - -
Gma03g00228 830 SUPERFAMILY RNI-like 101 432 - -
Gma03g00228 830 SUPERFAMILY Protein kinase-like (PK-like) 521 801 IPR011009 -
Gma03g00228 830 ProSitePatterns Protein kinases ATP-binding region signature. 540 563 IPR017441 GO:0005524
Gma03g00228 830 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Gma03g00228 830 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
Gma03g00228 830 ProSitePatterns Tyrosine protein kinases specific active-site signature. 658 670 IPR008266 GO:0004672|GO:0006468
Gma03g00228 830 Pfam Protein kinase domain 535 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00228 830 Gene3D Phosphorylase Kinase; domain 1 507 612 - -
Gma03g00228 830 ProSiteProfiles Protein kinase domain profile. 534 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00228 830 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 207 822 - -
Gma03g00228 830 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 40 280 - -
Gma03g00228 830 Gene3D Transferase(Phosphotransferase) domain 1 613 806 - -
Gma03g00228 830 SMART LRR_typ_2 223 246 IPR003591 -
Gma03g00228 830 SMART LRR_typ_2 295 319 IPR003591 -
Gma03g00228 830 SMART LRR_typ_2 247 271 IPR003591 -
Gma03g00228 830 SMART LRR_typ_2 127 150 IPR003591 -
Gma03g00228 830 SMART LRR_typ_2 175 199 IPR003591 -
Gma03g00228 830 SMART LRR_typ_2 151 174 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00228 Gma-Chr3 3090487 3093542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00228 104 706 Receptor kinase-like Gene Family AT4G08850 37.827 2.47e-131 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma03g00228 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00228 - - gmx:100789677 1539.24