Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00207 ATGGAAGCCAGAGAAGGTATTAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCTTACCATGTGGCTCCGAGGAGTGAAGCTCCAAACCAGGTTCATGTCCCTGATGGTGGTGGTGGTGCTGCTGCTACAGCTGCACCTGTTGGTGTCTCACCTGTGAGTGTGGGGTTGGATGGAACAGTTAAGAAGAAACGGGGTAGACCGAGGAAATATGGGCCTGATGGGTCTGTAACTATGGCATTGTCGCCAATGCCAATCTCGTCTTCTGCTCCGCCTTCGAATGACTTTTCATCCGGGAAGCGGGGGAAAATGCGGGGGATGGACTATAAGCCGTCGAAAAAAGTTGGCTTGGATTATATAGGTGACTTGAATGTATGCTCTGATGGTACAAATTTTATGCCACATATCATCACTGTCAATGCTGGCGAGGACATCACAATGAAGGTGATATCCTTTTCTCAACAAGGACCACGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGCCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATAACCAAGGAACAAGAAGCAGGACCGGTGGAATGTCTGTGTCGTTGGCTAGTCCTGATGGCCGTGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTGTAGCTGCCAGCCCTGTGCAGGTGGTGGTGGGAAGCTTTTTACCAAGCAGCCAGCAAGAACAGAAAATAAAGAAGCCAAAGTCTAGTGATTATGCACCGGTAACTGTTACTCCAGCGATTGCAGTGTCTTCTGCACCGCCACCTCCAACCAATGCTGAAAAAGAGGATGTGAATGTTATGGGTGGAGCACATGTACTGCAAAATTCTGGAACCCTTAACTCTAACCTCACTCCTCCCAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATGCCAGACTCTAGAAAATCAGCTACAGATATTAACATATCTTTGCCTGATAGTTAG 1041 0.4707 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGGAAATAAPVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVTMALSPMPISSSAPPSNDFSSGKRGKMRGMDYKPSKKVGLDYIGDLNVCSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQKIKKPKSSDYAPVTVTPAIAVSSAPPPPTNAEKEDVNVMGGAHVLQNSGTLNSNLTPPNAFRRDNWVNMHSMPDSRKSATDINISLPDS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00207 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 345 IPR039605 GO:0003680
Gma03g00207 346 ProSiteProfiles PPC domain profile profile. 131 273 IPR005175 -
Gma03g00207 346 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 345 - -
Gma03g00207 346 CDD DUF296 136 226 IPR005175 -
Gma03g00207 346 MobiDBLite consensus disorder prediction 83 98 - -
Gma03g00207 346 MobiDBLite consensus disorder prediction 24 107 - -
Gma03g00207 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Gma03g00207 346 Gene3D - 136 265 - -
Gma03g00207 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00207 Gma-Chr3 2589657 2597252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00207 10 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.860 1.36e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00207 - - gmx:100793726 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00207 03 2589657 2597252 Gma03g00207 03 2589657 2597252 ECH