Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00204 ATGAGTATAAACTCTAGTTGTAGCATAAGTGGTGGAAGCAGTAGTGGTGGAAACAATAACGGTGCCGGTGGTAGTGGCGGTAACAATGGTGGTGGTAGTCCTTGTGGTGCATGCAAATTTTTGAGGCGAAAGTGCGTGCCCGGTTGCATCTTTGCTCCGTACTTTGATTCGGAGCAAGGTGCCACGCACTTTGCCGCTGTGCACAAGGTTTTTGGTGCCAGTAACGTTTCCAAGTTGCTCCTCAACATTCCGGTGTATAAGAGGCTTGATGCGGTGGTCACAATTTGCTATGAAGCTCAAGCAAGGCTTAGAGATCCCGTGTATGGTTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCACCACCACCACCTTCTTCTCCACAAGCAACCACCATGGCACCTCCAGTGATCTCAATAGCTGAGCTCCCATCTACAGTTCCAGCCACATATGACCTCTCTTCACTTTTTGATCCAATGGCACAAAGTCCTTCATGGGCCGTGCAGCCAAGGCCCATAGAGTCACGTCAATATGTGGGTAGTGGGCCTAGTGGCCCATCGGCTACTAGTGCTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCAGTTGTTGCATGCTCTAATCCCTCCTACTCTCACCCGATTTCCAAATGA 756 0.4987 MSINSSCSISGGSSSGGNNNGAGGSGGNNGGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVYKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPPPPSSPQATTMAPPVISIAELPSTVPATYDLSSLFDPMAQSPSWAVQPRPIESRQYVGSGPSGPSATSASGGDLQALARELLHRHGSAPVVACSNPSYSHPISK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00204 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 8 234 - -
Gma03g00204 251 Pfam Lateral organ boundaries (LOB) domain 34 132 IPR004883 -
Gma03g00204 251 ProSiteProfiles LOB domain profile. 33 135 IPR004883 -
Gma03g00204 251 MobiDBLite consensus disorder prediction 139 156 - -
Gma03g00204 251 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 234 - -
Gma03g00204 251 MobiDBLite consensus disorder prediction 200 221 - -
Gma03g00204 251 MobiDBLite consensus disorder prediction 138 157 - -
Gma03g00204 251 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00204 Gma-Chr3 2525464 2530419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00204 37 236 AS2 family AT2G45420 64.115 2.08e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma03g00204 LOB 6.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00204 K21994 - gmx:100779541 415.616