Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00180 ATGCCGTCGCGTCCGCCGCCGCTCTCACCACCCGCCACCGCCGCCGCATCTCACCGCCGCGAGATAATCCTATGCGGCGCAATCGGCGGCGCGCTCTTCCTAACGGCGTTAATAATCTCCGTCATGATTTTCATCTACCGCAAGCTCTCGTACTCCCGAACGGCGCCGTTCGAGCACAACCAGCGGCGTTTCTCGTACACCGTTCTCCGCCGCGCCACGAACTCGTTCGCTCCCTCCACGAAGCTCGGCCACGGAGGCTTCGGTTCGGTTCACAAGGCCACACTGCCTTCCGGCCAGACCGTTGCGCTTAAAGTTATGGACTCGCCCGGTTCGCTTCAGGGAGAGAGAGAGTTCCACAACGAGCTAACGCTGTGTTCGAATCTCAAATCTCCGTTTGTGATTTCGCTTTTAGGTTTTTCTTCCGACCGGCGTGGAAAAAAGCTGGTTTTGGTTTACGAGCTTATGCCGAACCGGAGTTTGCAGGACGCGCTTTTGGATAGAAGGTGCCCGGAGTTGATGAGCTGGGGGAAGAGGTTCGACGTGGCGGTTTCGGTGGCGAGGGGATTGGAGTATCTGCATCATGTCTGCGACCCGCCGGTGATTCATGGTGATATTAAGCCGAGTAATGTGTTGTTGGATAGGGATTTTAGGGCCAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGAATGTGGAGGATCTAGGAATGGTGGATGAGAACGAGAAGAAGAAAGATGAGGAATTTAGTGTTTTGGAAGGGGAGAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCGGTGAGGGCTGCGGAGTATTCGGATGCTTCGCCGGTGGGGGGTGATAAGTTGAGTGTTGTGTCTGATGGTGGGGGGTGTTTTGAGAGTGTTGATAGTGGGAGTGTGAGTGTGAATAAGAAGAAGTGTGGTGGTGGTGGCGGTGGTGGTGGTTCGGGGAGGGATTGGTGGTGGAGGCAGGAGAGTGGGGGAGGAGGGGAATCCGGGAGGGTGAAGGATTATGTGATGGAGTGGATCGGGAGCGAGATAAAGAAGGAGAGGCCGAAGAGCGAATGGGTTGATTCGTGTTCGTCGTCTTCTCCGAAGGTGGAGAATGAGAATGGGAACGAGAGTGTGAGTGTGAGTGTGAATGTGAATGATAAGAGTAAGAAGAAGAAGGAGAGGAAGAAGTTGGATTGGTGGGCCTCGCTTGACGAGGAGAGGGTGAAGGGGAAGGCGAAGAAGAAGAATAGGAAGCCAAGGGAGTGGTGGAAGGAGGAGTTTTGCGAGGAATTGTCGAAGAAGAGTAGGAAGAAGAAGAGGGGGATGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAGGAAGAGGAAGAGTAAAGGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGGTTGAGTGGTGAGATGAGGAACAATGGGAGGAGGAATAGCCAAGATTGGGGGGTTAGTGGGGATGTGCCAAAGAGTGGTGGGATTAGCAGCACCCCTAGTATGAGAGGGACTGTTTGTTACATTGCTCCTGAGTATGGTGGTGGAGGGCAATTGTCTGAGAAGTGTGATGTGTACAGTTTTGGGGTTCTGCTTTTGGTGCTGGTGGCCGGGAGGCGGCCGCTGCAGGTGACAGCCTCACCAATTTCTGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTTTTGGATCTTGTTGACACTTCTATCCATTCCTTGGATAAGGAGCAGGCGCTTCTCTGCATCACCATTGCCTTGTTGTGTCTGCAGAGGTCCCCCGGGAAGAGGCCTTCCATCAAGGAGGTTGTGGGGATGCTTAGTGGGGAGGCTGAGCCACCACACTTGCCGTTCGAGTTCTCACCATCACCTCCCTCGAATTTCCCATTCAAGACCCGGAAGAAGGCTCGGTGA 1950 0.5431 MPSRPPPLSPPATAAASHRREIILCGAIGGALFLTALIISVMIFIYRKLSYSRTAPFEHNQRRFSYTVLRRATNSFAPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSLQGEREFHNELTLCSNLKSPFVISLLGFSSDRRGKKLVLVYELMPNRSLQDALLDRRCPELMSWGKRFDVAVSVARGLEYLHHVCDPPVIHGDIKPSNVLLDRDFRAKIGDFGLARVKNVEDLGMVDENEKKKDEEFSVLEGESVVDVDRSPESCPVRAAEYSDASPVGGDKLSVVSDGGGCFESVDSGSVSVNKKKCGGGGGGGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIKKERPKSEWVDSCSSSSPKVENENGNESVSVSVNVNDKSKKKKERKKLDWWASLDEERVKGKAKKKNRKPREWWKEEFCEELSKKSRKKKRGMEWWQREEEGVEQKRKRKSKGSRGSIDWWLDGLSGEMRNNGRRNSQDWGVSGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRSPGKRPSIKEVVGMLSGEAEPPHLPFEFSPSPPSNFPFKTRKKAR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00180 649 PANTHER OS07G0586332 PROTEIN 1 649 - -
Gma03g00180 649 MobiDBLite consensus disorder prediction 439 460 - -
Gma03g00180 649 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Gma03g00180 649 ProSiteProfiles Protein kinase domain profile. 76 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00180 649 MobiDBLite consensus disorder prediction 309 330 - -
Gma03g00180 649 SUPERFAMILY Protein kinase-like (PK-like) 50 639 IPR011009 -
Gma03g00180 649 Pfam Protein kinase domain 79 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00180 649 Pfam Protein kinase domain 488 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00180 649 SMART serkin_6 76 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00180 649 MobiDBLite consensus disorder prediction 627 649 - -
Gma03g00180 649 MobiDBLite consensus disorder prediction 356 391 - -
Gma03g00180 649 Gene3D Transferase(Phosphotransferase) domain 1 155 258 - -
Gma03g00180 649 Gene3D Transferase(Phosphotransferase) domain 1 478 625 - -
Gma03g00180 649 PANTHER OS07G0586332 PROTEIN 1 649 IPR044576 -
Gma03g00180 649 MobiDBLite consensus disorder prediction 359 384 - -
Gma03g00180 649 MobiDBLite consensus disorder prediction 439 457 - -
Gma03g00180 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Gma03g00180 649 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00180 Gma-Chr3 2199466 2201415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00180 497 619 Receptor kinase-like Gene Family AT3G58690 36.434 1.36e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gma03g00180 Pkinase 9.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00180 - - gmx:100814933 1083.17