Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00176 ATGGGTTACAAATTTGGTCACATGGCCAACTCTAGTGCTAACAAAACCATAATTAAATTGATAATGGCTTGGTTTCAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAGTCTAGAAGCAAAAGACATACTATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTTGAAAACAAAGCTCATGATCAGTGGCGAATCCAAGACCCTAAgtctgccactgcTCATGATTATGCAATTGATAACTGGACTCTGGGTATCCTTTGCTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGTTGATACCTTAAAAGTTGACCTATGTTTCCCTTCTACTCCTAATGTTTCTTTAGAAGCCAAAAATCTTATTAGTCGACTGCTGGTAAAAGACTCTTCACGAAGGCTCTCACTTCAGAGGATAATGAAGCATCCTTGGATATCCAAGAATGCAGATCCCAAGGGTGTCTGCAACTAG 495 0.396 MGYKFGHMANSSANKTIIKLIMAWFQGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDQWRIQDPKSATAHDYAIDNWTLGILCYEFLYGAPPFEAESQVDTLKVDLCFPSTPNVSLEAKNLISRLLVKDSSRRLSLQRIMKHPWISKNADPKGVCN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00176 164 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00176 164 SUPERFAMILY Protein kinase-like (PK-like) 23 156 IPR011009 -
Gma03g00176 164 SMART serkin_6 3 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00176 164 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 25 163 IPR030616 GO:0004672
Gma03g00176 164 Gene3D Transferase(Phosphotransferase) domain 1 19 161 - -
Gma03g00176 164 Pfam Protein kinase domain 26 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00176 Gma-Chr3 2164928 2167860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00176 27 159 CBL-interacting serine-threonine protein kinases AT5G10930 36.620 5.22e-20 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gma03g00176 Pkinase 3.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00176 K08850 - gmx:100775802 237.654