Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00151 ATGGCTGGAGCTGAAGCTACAAAATATGCTTCTTCTGCTACAAGTCCTACAATCACTGCTTCAAACAACAGCATGGCTACCAAATCGAACAAACCAATTTCCGTTAGAAGGTTCATTGGGGTGAGGCAAAGACCCTCAGGAAGGTGGGTGGCTGAGATCAAAGACTCTTCTCAGCACGTGAGGTTGTGGCTTGGAACCTATGATACTCCTGAAGAAGCTGCAAGGGCTTATGATGAAGCTGCAAGAGCTCTGAGAGGTGAAAATGCTCGAACCAACTTTGCACCAGTGAGTCAACTAGTCAATGGCCAACTGGGTCAACAATCAGGGTTTAATAATAATAACAACCTTCTTTCAACTGGGTCTGATATTGGGAAGCATGGTTTGAGCTTTGCATCCTTGAAGGCCAAGTTGAGCAAGAATCTTCAGAACATTATGGCTAGGGCAAGTGATCACAACAACAACAACAACAACAAGTCCTCAAAGAGTAGGGTGAGTGACCACTTCACCTTTGCCAGCATCTTCCACCGTAGGAGTTACCAAATCCCTGAAGGTGACATGATGAAGAACATTGAGAAAGTGGTGCAGCCTAGTATTATTGTGCCTCCTATGGAACAAAGTGGTGGTTTTGGTGGTGGTGATTATAATTCTTGTGTTTCCAACTGGGAAACTGCTTCTAGTGTCTCTGATTGCAGCTCTGAGTGGGTAGGGTTTGGGAATAATAATTCGAAACTCGGGTTGGAGTCAGACGGGTCGGAGATCGGAGAGGCTAGTGTTGGTGATCAAGGGTTCTTGGAACAGTTGATGGGGTGGGTTGAAAGCCCTGATGTTAGTGATGAGGGTTCAAGGAGTAAGAGGTTCAAGGTGTCTTCTTCTGTGCTTGTGCCACCTACTTTCACTGGCTCTCCTTATGATTGTGGATCCccttataccggttatgcctctccttataatagcggttatgcctctccatataACAACAACGGTTGTGCCTCCCCTTGTAATGGTTATGCTTCTCCTTATTACAATAATAAGAAGTGA 1038 0.4316 MAGAEATKYASSATSPTITASNNSMATKSNKPISVRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFAPVSQLVNGQLGQQSGFNNNNNLLSTGSDIGKHGLSFASLKAKLSKNLQNIMARASDHNNNNNNKSSKSRVSDHFTFASIFHRRSYQIPEGDMMKNIEKVVQPSIIVPPMEQSGGFGGGDYNSCVSNWETASSVSDCSSEWVGFGNNNSKLGLESDGSEIGEASVGDQGFLEQLMGWVESPDVSDEGSRSKRFKVSSSVLVPPTFTGSPYDCGSPYTGYASPYNSGYASPYNNNGCASPCNGYASPYYNNKK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00151 345 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Gma03g00151 345 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Gma03g00151 345 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Gma03g00151 345 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Gma03g00151 345 MobiDBLite consensus disorder prediction 1 26 - -
Gma03g00151 345 SUPERFAMILY DNA-binding domain 38 94 IPR016177 GO:0003677
Gma03g00151 345 Coils Coil 134 154 - -
Gma03g00151 345 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Gma03g00151 345 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 284 - -
Gma03g00151 345 MobiDBLite consensus disorder prediction 8 26 - -
Gma03g00151 345 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Gma03g00151 345 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 284 - -
Gma03g00151 345 CDD AP2 37 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00151 Gma-Chr3 1829727 1830764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00151 37 94 AP2-EREBP Transcription Factor Family AT5G19790 74.138 1.04e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma03g00151 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00151 K09286 - gmx:100799444 562.377