Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00145 ATGAGTTTTGGGGGTTTTTTAGACGACAAATCAGGTAGTGGCGGTGCCAGAATCAACAATTTTTCAGATATTCCTTACAATAACAACAACGTTACCAACACCACCACCACCAACAACAACAACAACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTCGTGACCACAACTCCCACTTTAGCCAAATCCATGTTCAACTCACCAGGGCTATCTCTGGCACTTCAGCAAACGAGTATAGATGGACAAGAAGATGTGAATAGAATGGCTGAGAATAGCTTCGAACCGAACGGTTTGAGAAGAAGCCGTGAAGATGAACATGAAAGCAGATCTGGCAGCGACAACATGGACGGCGGTTCCGGCGACGAACACGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAAAAGCAAAGGCTTGAACTGAGTAGAAGGCTGTGTTTGGAAACTCGTCAGGTGAAGTTTTGGTTCCAAAATCGTCGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACGTTGCTGAGGCAAGAGAACGACAAGCTTCGAGCGGAGAACATGTCCATAAGGGACGCAATGAGGAACCCCATGTGCTCCAATTGCGGCGGCCTAGCCATCATCGGCGAGATTTCGCTGGAGGAGCAGCACCTCCGCATCGAGAATGCGCGCCTCAAGGACGAACTTGACCGCGTGTGTGCACTCGCGGGCAAGTTCTTGGGGCGCCCCGTTTCCTCCCTGCCGAGTCTAGAGCTCGGCATGGGAGGAAACGGGTTCGCAGGAATGCCCGCGGCAACATTGCCGCTGGCACAAGATTTCGCAATGGGTATGTCTGTGTCAATGAATAATAATGCGTTGGCTATGGTGTCTCCACCGACTAGTACTAGGCCGGCCACGGCCGGATTCGATAGGTCGGTGGAGAGGTCGATGTTTCTCGAGCTAGCCTTGGCTGCTATGGATGAGTTGGTGAAGATGGCGCAGACTGGGGAGCCTCTTTGGATGAGGAATGTTGAAGGAGGGAGggaaattttgaaccatgaggagtacgtgaggaacttcactccttccattggtttgagacccaatggttttgtgtctgaggcctctagggaaaatgggatggtcatcattaacagcttggcacttgttgagactcttatggaCTCGaATCGGTGGGCAGAGATGTTTCCTTGTATCATTGCCAGAACATCCACCACGGAAGTGATATCTAGTGGAATTAACGGAACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTTCCGGTTCGTGAGGTGAATTTCCTACGGTTTTGCAAGCAGCACGCAGAAGGGTTGTGGGCTGTGGTGGATGTGTCCATAGATAGCATCAGAGAAAGTTCAGGAGCACCCACTTTTGTGAACGGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCCAATGGTTATTCCAAGGTGACATGGGTGGAGCATGCAGAATACGAAGAAAGCCAAGTTCACCAGCTCTATAGGCCTTTGTTGAGCTCAGGCATGGGGTTTGGTGCCCAACGTTGGGTGGCTACCCTTCAACGCCAACGCGAGTGCCTTGCCATTCTAATGTCCTCAGCAGCACCCTCTCGAGACCATTCCGCAATAACAGCAGGGGGAAGGAGGAGCATGGTGAAGCTGGCGCAGCGGATGACGAACAACTTCTGCGCGGGGGTGTGCGCCTCGACGGTGCACAAGTGGAACAAGCTCAACGCCGCCGCTAACGTCGACGAGGATGTCAGGGTCATGACGCGCAAGAGCGTCGACGACCCCGGGGAGCCGCCGGGGATCGTCCTCAGCGCCGCCACCTCCGTCTGGCTACCCGTCTCCCCCCACCGCCTCTTCGACTTCCTCCGCGACGAGCGCCTCCGCAGCGAGTGGGACATCCTCTCCAACGGTGGCCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACGCCGTCTCTCTCCTTAGAGCCAGTGCGATAAATTCCAACCAGAGTAGCATGCTGATACTGCAGGAGACATGCATAGACGCAGCAGGGTCGCTTGTGGTGTACGCGCCGGTGGATATCCCAGCCATGCACGTGGTGATGAACGGTGGCGATTCGGCTTACGTGGCGTTGTTACCTTCAGGGTTCGCGATCGTCCCCGATGGGCCTGGGTCTCGTGGGCCTCATCAGAACGGGCCCACTTCCTCAACAACAACAACAACAAACGGCGGTGATAACGGCGTGACGCGCGTGAGTGGGTCCCTCCTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCGAAGCTCACGGTAGAGTCCGTGGAAACCGTGAACAACCTCATCTCCTGCACCGTTCAAAAGATCAAAGCCGCGCTACACTGCGAAAGTTAA 2511 0.5145 MSFGGFLDDKSGSGGARINNFSDIPYNNNNVTNTTTTNNNNNDRMPFGAISQPRLVTTTPTLAKSMFNSPGLSLALQQTSIDGQEDVNRMAENSFEPNGLRRSREDEHESRSGSDNMDGGSGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGLAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLPSLELGMGGNGFAGMPAATLPLAQDFAMGMSVSMNNNALAMVSPPTSTRPATAGFDRSVERSMFLELALAAMDELVKMAQTGEPLWMRNVEGGREILNHEEYVRNFTPSIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDSIRESSGAPTFVNGRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQRECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNAAANVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNAVSLLRASAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPHQNGPTSSTTTTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00145 836 Coils Coil 185 217 - -
Gma03g00145 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 78 833 - -
Gma03g00145 836 MobiDBLite consensus disorder prediction 98 133 - -
Gma03g00145 836 SUPERFAMILY Homeodomain-like 117 191 IPR009057 -
Gma03g00145 836 Gene3D - 405 559 IPR023393 -
Gma03g00145 836 Pfam Homeodomain 134 189 IPR001356 GO:0003677
Gma03g00145 836 MobiDBLite consensus disorder prediction 761 783 - -
Gma03g00145 836 Pfam START domain 337 561 IPR002913 GO:0008289
Gma03g00145 836 MobiDBLite consensus disorder prediction 765 783 - -
Gma03g00145 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 78 833 IPR042160 -
Gma03g00145 836 MobiDBLite consensus disorder prediction 92 141 - -
Gma03g00145 836 CDD START_ArGLABRA2_like 332 560 - -
Gma03g00145 836 CDD homeodomain 133 191 IPR001356 GO:0003677
Gma03g00145 836 Gene3D - 121 207 - -
Gma03g00145 836 SUPERFAMILY Bet v1-like 588 829 - -
Gma03g00145 836 SMART HOX_1 132 195 IPR001356 GO:0003677
Gma03g00145 836 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Gma03g00145 836 ProSiteProfiles START domain profile. 328 564 IPR002913 GO:0008289
Gma03g00145 836 SMART START_1 337 561 IPR002913 GO:0008289
Gma03g00145 836 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Gma03g00145 836 SUPERFAMILY Bet v1-like 330 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00145 Gma-Chr3 1720418 1727696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00145 1 836 Homeobox Transcription Factor Family AT3G61150 63.765 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma03g00145 START 3.5e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00145 K09338 - gmx:100818372 1603.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00145 03 1720418 1727696 Gma03g00145 03 1720418 1727696 ECH
Gma07g00699 07 7253580 7261041 Gma03g00145 03 1720418 1727696 ECH