Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma03g00121 | ATGTCATTCACAGGAACTCTTGATAAATGCACAGCATGTGATAAGACTGTCTATGTGGTTGACTTGTTAACTCTTGAAGGAATTACTTACCATAAAAACTGCTTCAAATGCAGCCACTGCAAGGGATGTCTTACGATGAGCACATACTCCTCAATGGATGGAATTCTTTATTGCAAGACACATTTTGAACAGCTTTTCAAGGAATCTGGAAATTTCAGCAAGAACTTTGGTAAGACGAAGACCATCTTTTGGCCCATCTTTTTAACCCCCAGCAAGCTATCTTCCATGTTCAGTGGAACCCTTGACAAATGCTCAGTTTGCACAAAAACAGTCTATCCTCTGGAAAAGATGACACTTGAAGGGGAATGCTTCCACAAGACTTGCTTTAGGTGTGCTCATGCAGGGTGCCCTCTCACACATTCAAACTATGCTGCCCTTGATGGTGTCCTCTACTGTAGGGTCCACTTTGCACAACTTTTCATGGAGAAAGGGAACTACAGCCATGTGCTCCAAGCTGCTGCACACAGAAGGACTGTGACTTCGCTGACCGTTTTAACAAAACACACAACTCATTCATTCTTTCACACTAATTCCAACCTTTCTGCTCCAATCTTCGTTTCGTTTTTTTGTTTTGAGGAATTGGTTGTAGAATGTGTTGAAGAGAAATGGTTATGTGAGAGTGTTTGGTTTTGGAAGATAACATATCTTGATATGGATATAGCTTTTCGGTTACCACAGTCAAATGTGGTATTGGATGGTTTGGATTCCTGCATTGTGTTTGGAGGGAGAGGTTTTGGTTGTGCTTTTCTCGGAAACTCGAGGACTATTCCGAAGGCTCGATTTAGTGGGGTGAACAAGATAGGTAGTAGGAGTAGTTCAAGAGTAGAATGCTTAGGAGATTTGAAAGTTTCGATTGGGAACAGGGGTTTGTCTTGGAAGAATAATAGACCTTTTAGGAAGAATAGGGAAATTTGGTCTAAGTGTCAGGGTAATGATTCTTTATCATATGTCAATGGCAATGGACGGAATGTTGGTAGGTTGGATGATGCGGATGAGGACTCCAATTCCAGTGTTGAATTGAGTGAACCTTTGGGAGAAGAAGAAAAAGGGCAAGGAGGGAGGAAAGAAGATGGGGGTGAAGTAGAAATAGAGGTACAAAGTGTGGATGAATTGAAGGAACTGTTGCAAAAGGCCATGAAAGAATTAGAAGCTGCTAGAGTTAACAGCATCGTTTTCGAGGAAAAGGTTAAGAAGATATCGGAGACTGCAATTTTTTTGCAGGATGAAGCTGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATGTCATCCAAGATATCGTGAGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGTCTCTTTCTCTTGCTGAGGCAAGGCTTCAAGTGGCCATGGACTCTTTGGAGGTTACAAAAGAAGTTTATGATACCCCACAAGGTTCTAACAAGAGTAATGGTGACGAAGATATAATTCAAGAGGAGAAAGAACTTTTGCTTGCTCAGGAGGATATCAGGGAATTCCAGACAAATTTAGCAAATTGTGAGAATGAGCTAAGATGCTTGCAATGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAAATTGCATGAAATTGCAGAACAGGCACAGCTGAAAGCAGCGAAAGCAGAAGAAGATGTTGCAAACATAATGCTTTTAGCAGAGCGAGCTGTTGCCGCTGAACTCGAGGCTACACAACACATGAATGATGCAGAGATTGCATTACAGAAATCAGACAAATCTGCCTCTAGTTTTAATGCTGATACCACAGACACTCTACAAGTACAAGATGTTGTGGCTATTTCTGAGGAGGAAGTGGTTCAAGGTTTATCTGGTGATGATGTTGATAAAAGAGAGCTTGATTACTTAGTCGATGGGGGGGAGCCTTTGCTTGCTATGCAATCACCAGAAAACACCAGCCAAAGTTTGGAAGACACGGTACAGTCTGATTATCTGAGTGATCATGAGAATGGCCAGTTAAGCTTAGACTCTCCTAAAGAAGCTGAAGTTGAAATAGGAAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAGGAAACACAGAAAGATTCGATGAGAGATAATTCACTGTTGGCTCCCAAGACATCATTGAAGAAGTCTTCCCGATTTTTTCCAGCATCATTCTTCTCTTTTACTGCAGAAGAGACTGATTACACACCAGCATCAGTTTTCCATGGTCTTGTAGAGTCTGCACAGAAGCAACTACCCAAGCTGGTTGTTGGGTTATTGTTAATTGGAGCAGGGCTTGTGCTCTACACAAATAGAACAGAGAGGAGTGCCCAGCTGCTTCAGCAGCCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCATTGGTTAGAGAGCTTCAGGAGCTTCCCAGGAGAATTAAGAATATTATTGCATCATTACCTGATCAAGAGGTGAATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTACTTGCAAGTGTTGTATTTGTGCCAATATTTCAAAAGATTCCTGGAGGAAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTCTCGGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCCCAGGTTTTGGTGACTGCTGTAGTTGTCGGCTTGGTGGCTCATTATATTTGTGGTCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTTTTACAGGAGAGAGGTGAGAGCACATCACGGCATGGAAGGGCTACATTTTCTGTTCTGCTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTCAAGGCAGTGGTTGCTATTTCAGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCTATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACCAGCCTTCTCACAGCCAGGGCTGGACTTTCCATGGCATTGGGGGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAGTTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTACTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTCCAGTCATTACAGGGGCCCTGGGACTCTTGATATTTGGCAAAACTTTGTTGGTTTCTTTAATCGGAAGAGCTTTTGGTATTTCTCTCATTTCTGCTATCAGAGTGGGTCTTCTTCTTGCTCCGGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCTTTACTGTTTCTTGTTGTGGGAATTTCAATGGCTCTCACTCCATGGCTAGCTGAAGGAGGTCAGCTCCTTGCTTCCCGTTTTGAGTTACACGATGTTCGAAGTTTATTACCTGTGGAAAGTGAGACAGATGATCTGCAAAATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAGATCATTGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGACAATTGGACGTTCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACACAAGGTTGGGGCTGAAAGGGCAAGTGCTGCTGCGGTAACTCTAGATTCCCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGCACTTCCCAAACGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGATTAAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTGCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCGACTATAAATGAATTCAGATCCCGCCATCTTTCTGAGCTCACTGAACTATCCGAAACAAATGGAACTTCTTTTGGATATGGATATAATAGAACTACGAGCAAAGCCAAATCTCATTCCCCAGATTCATCAGATGATACTCAAGTCTCTGAAGGTAAACTGGCGACATGA | 4323 | 0.4266 | MSFTGTLDKCTACDKTVYVVDLLTLEGITYHKNCFKCSHCKGCLTMSTYSSMDGILYCKTHFEQLFKESGNFSKNFGKTKTIFWPIFLTPSKLSSMFSGTLDKCSVCTKTVYPLEKMTLEGECFHKTCFRCAHAGCPLTHSNYAALDGVLYCRVHFAQLFMEKGNYSHVLQAAAHRRTVTSLTVLTKHTTHSFFHTNSNLSAPIFVSFFCFEELVVECVEEKWLCESVWFWKITYLDMDIAFRLPQSNVVLDGLDSCIVFGGRGFGCAFLGNSRTIPKARFSGVNKIGSRSSSRVECLGDLKVSIGNRGLSWKNNRPFRKNREIWSKCQGNDSLSYVNGNGRNVGRLDDADEDSNSSVELSEPLGEEEKGQGGRKEDGGEVEIEVQSVDELKELLQKAMKELEAARVNSIVFEEKVKKISETAIFLQDEAASAWNNVTSTLDVIQDIVSQEFVAKEAVQKATMSLSLAEARLQVAMDSLEVTKEVYDTPQGSNKSNGDEDIIQEEKELLLAQEDIREFQTNLANCENELRCLQCRKEELQNEVNKLHEIAEQAQLKAAKAEEDVANIMLLAERAVAAELEATQHMNDAEIALQKSDKSASSFNADTTDTLQVQDVVAISEEEVVQGLSGDDVDKRELDYLVDGGEPLLAMQSPENTSQSLEDTVQSDYLSDHENGQLSLDSPKEAEVEIGKSKNVVQTKKQETQKDSMRDNSLLAPKTSLKKSSRFFPASFFSFTAEETDYTPASVFHGLVESAQKQLPKLVVGLLLIGAGLVLYTNRTERSAQLLQQPEVIATTVEEVSSTAKPLVRELQELPRRIKNIIASLPDQEVNEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAVVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGALGLLIFGKTLLVSLIGRAFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAEGGQLLASRFELHDVRSLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVTIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELSETNGTSFGYGYNRTTSKAKSHSPDSSDDTQVSEGKLAT | 1440 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma03g00121 | 1440 | ProSitePatterns | LIM zinc-binding domain signature. | 10 | 44 | IPR001781 | - | |
| Gma03g00121 | 1440 | Gene3D | Cysteine Rich Protein | 100 | 168 | - | - | |
| Gma03g00121 | 1440 | Pfam | LIM domain | 10 | 65 | IPR001781 | - | |
| Gma03g00121 | 1440 | Pfam | LIM domain | 104 | 159 | IPR001781 | - | |
| Gma03g00121 | 1440 | SMART | lim_4 | 103 | 155 | IPR001781 | - | |
| Gma03g00121 | 1440 | SMART | lim_4 | 9 | 61 | IPR001781 | - | |
| Gma03g00121 | 1440 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 238 | 1439 | - | - | |
| Gma03g00121 | 1440 | Coils | Coil | 501 | 570 | - | - | |
| Gma03g00121 | 1440 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 130 | 169 | - | - | |
| Gma03g00121 | 1440 | ProSiteProfiles | RCK N-terminal domain profile. | 1244 | 1366 | IPR003148 | GO:0006813 |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma03g00121 | - | - | gmx:100800772 | 2175.21 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma03g00121 | 03 | 1499456 | 1514547 | Gma03g00121 | 03 | 1499456 | 1514547 | ECH |
Showing 1 to 1 of 1 entries