Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00090 ATGGCTAACAACGGGAGTCCAAAGCATGAGAAGATGCAAAAGAACCTATGCACACAGCTAGCTGTTGCAGTGAGAAGCATTCAATGGAGCTATGGTATTTTCTGGTCACCTTCAACCACTGAAGAAAGGGTATTGGAATGGAGGGAAGGCTACTACAATGGAGACATTAAAACAAGAAAGACAGTGCAAGCCACGGAATTGGAAATAAAGGCTGATAAAATAGGCCTGCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCATCCACAAACTAAAAGGCCTTCTGTTGCATTAGCTCCAGAGGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACAGTCTGGTTATGCAATGCTCAACATGCGGATAGTAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGATATTAACATTGATATTGTGTGTCAAACCTGTTTTCCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCACAACTGAACTGGTTGCTGAGGATCCTAGTCTCATTCAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTATCCTTGATAAGCCACATGATGACAAATATCCAACATGCACCAAGGGTGACCAAAGGGTGTTAGATACAATGGCTTTAGAGAACCCATGTTCTCTTGAAGAAAAAATCAAATTTGATCATGAACCCATCAATGAATTACAAGATGATAACAATGAAGGTTCTAATGGTTGTGAGCACCATTTCCCTATGGATGGATCCATGATTGAAGGTATCAATGGTGTGCCATCTCAAGTGCATTTTGTGAATGATGATGCCTTGGTCATTGGTGCTCCTGATTCCCTTAGTTCTTGTGATTGTATGTCTGAAGCTTCTGAGAATCAAGGCAAGGATTCCAAGAATGTAGGCCAAACTCAACTTATGGAACTTCAAGATTGCCATAAACCAAAGAGAAGCTCCTTGGATGTGGGAGCTGATGAGGACTTGTGCTACATAAGAACACTTTGTGCTATTTTGGGGAACTCATCAACTTTTAAGCCAAACCCTTATGCTGGTAACTCAAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGCCAAAATTGCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTCTTCTCTCAAGTCACAAAAAGGGAATGACAGAATGGAGTGGACTAGTAAATTGGAAAATGATGATCATGGTTTAATAGGGAAAGCATTCTCTGATAAGAAAAGAGAAATTAAAAACTTTCAAGTTGTCAAATCAATGGTTCCATCTTCTATAAGTGAGGTGGAGAAGATTTCAATTCTTGGGGACACAATTAAGTACTTGAAAAAGCTTGAGACAAGAGTGGAAGAGCTAGAATCATACATGGAAGTTACAGGTCCTGAAGCAAGAAAGAGGAGTAAATGCCCTGATGTTCTAGAGCAGATGTCAGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAGCCTTGGATGAACAAGAGGAAGGCTTGTGGTATTGATGAGATAGACACAGAGCTAGAAAGAATTACTTCTGAAGAAGCAAAAGCTTTGGATGTGAAAGTCAATGTGAAGGATCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGAAATACATACTGTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCAGACAGTTGAATCTTCAACAAGTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCAATGAGGATGATCAAAGAAGCGCTGTGGAAAGTATCTGGAAATATTTGA 1968 0.4009 MANNGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWSPSTTEERVLEWREGYYNGDIKTRKTVQATELEIKADKIGLQRSEQLKELYKFLLAGEADHPQTKRPSVALAPEDLSDLEWYYLVCMSFVFNHNQSLPGRALEIGDTVWLCNAQHADSKVFSRSLLAKILTLILCVKPVFQTVVCFPYQKGVIEIGTTELVAEDPSLIQHVKACFLEISKPTCSDKSSSILDKPHDDKYPTCTKGDQRVLDTMALENPCSLEEKIKFDHEPINELQDDNNEGSNGCEHHFPMDGSMIEGINGVPSQVHFVNDDALVIGAPDSLSSCDCMSEASENQGKDSKNVGQTQLMELQDCHKPKRSSLDVGADEDLCYIRTLCAILGNSSTFKPNPYAGNSNCKSSFAKWKKGRVSERKRPKLHQSMLKKTLFKVPFMHRSYSSLKSQKGNDRMEWTSKLENDDHGLIGKAFSDKKREIKNFQVVKSMVPSSISEVEKISILGDTIKYLKKLETRVEELESYMEVTGPEARKRSKCPDVLEQMSDNYGTRKICMGMKPWMNKRKACGIDEIDTELERITSEEAKALDVKVNVKDQEVLIEMKCPYRKYILYDIMDTINNLHLDAQTVESSTSDGVLTLTLKSKFRGAATAPMRMIKEALWKVSGNI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00090 655 PANTHER TRANSCRIPTION FACTOR TT8 2 653 - -
Gma03g00090 655 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 210 IPR025610 -
Gma03g00090 655 Gene3D - 464 533 IPR036638 GO:0046983
Gma03g00090 655 PANTHER TRANSCRIPTION FACTOR MYC1 2 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00090 Gma-Chr3 1050244 1055585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00090 14 652 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 38.336 1.87e-118 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00090 - - gmx:100798122 1301.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00090 03 1050244 1055585 Gma03g00090 03 1050244 1055585 ECH