Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00084 ATGGCTGTGGTGAGTCCTATGCCTGCAACTCCACCACAGGTCAATCCTGTGAACTTGCTTCGTAATACTGGGGTTCCTGGAATCATGACTAGTAGGAGAGAAATTGTAAATGAACCTAGTCCAAGTATGGTTAATGAGAcaatctatgttgccgtggcaaaagatgtgaaagatagcaaattaaatctgatatgggcaaTACAGAACTCTGGAGGAAGGAGAATTTGCATCCTTCATGTTCACGTGCCAGCACCTATGATCCCCTTGGCCTTGATGGGTGCCAAATTTCCTGCAAGTGCGCTGAGAGAGGAGGGAGTTCAAGATTACCACGAAAGAGAAAGACTAAAAATACACAAGACTCTGGATGCTTACCTTTTTATCTGTCAAAGGATGGGGGTTCGTGCAAGGAAACTACTACACATTGAAATGGATTGCATAGAAAAAGGAATTGTTGAACTCATCTCCCGGTATGGCATACAGAAACTTGTAATGGGAGCAGCATCTGATAAGTACCATTCAAGGAGGATGACATCCCTCAGATCTAAGAAAGCTATATATGTATGTGAACAAGCTCCAGCTTCTTGTCATATACAGTTTATCTGCAACGGCTACCTCATACATACAAGGGATTGCAGTTTGAATAGAGGGAATGTAGAGGTTGAATTTCCTTTGTTGCAGCAAATGGCAAACTCTGAAGTTGGACATTCACCTAACTTGAGTTTCCAATCAATTTTGCAAGGGCAAAACCATGGGATAAAATTAACTAATCCAGCTCAAGAGTTATTTCGTAGAGTAAGGTCTGTTAATGATGGACATATGAGAAGCCTTGAATCTGTTTCTTCTTCAGAAGGGTTTTTAACTCCACCAAGCAAGTTCAGTAAAAACATAAGTTCTATTGAACCAGGATTGACCCCAAATTTGATTAATGATGGAAGTGAGAATGCATTAGACTTGATTTTGAATGACCCTTCTCTGATTAACAAGGATCTTCATCATTCATCATCTCCTAGTGTACTGGATGAAGGAATGGATGATGCTCTCTATCATCAACTTGAACAAGTAATGGCTGAGGCTTCGAATGCTAGGCGTGATGCATATCAAGAAACTGTTAGGCGAGGTAAAGCTGAAAAAGATGCTATTGATGCTATTCACAGGGCTAAAGCCACTGAAAACTTGTACAAAGAAGAGCTGAAACTAAGGAAAGAACAAGAAGAAGCAGTAGAAAAAGCAAATGAAAAACTTAACAATATGAAGAGCCAGACAGACAAAGTTAATGAGGAACTCCGACTTGCCTTAGATCAGAACTCATCACTAGAGAATCAAATTGCATCAACTGAACTTATGGTAAAGGAGTTGAAGCAAAAGATTATATTTGCCTTGGACCTGTTACAAAACTACAAGGATGAGCTAGATGATTTGCAAATACAGCGTGATAATGCAGTGGGAGAGGCTGAGGAGTTTAGGAGAAAACAAGGGGAAGCCTCATCAAGCACACAGGAGCTTCACTGCTTCTCAGATTTTTCCTTTCAAGAGATTAAAGAAGCAACAAGTAACTTCAATCCATCCAAGAAGATTGGAGAAGGTGGATATGGAAGTATATTTAAAGGTGTCTTGCGTCACACTGAGGTGGCTATAAAAATGTTGAATCCTGACAGCACGCAAGGACCTTTGGAGTTTCAACAGGAGGTTGAAGTATTGAGCAAGTTAAGGCATCCCAATCTTATCACACTTATAGGAGCCTGCACAGAATCTTGGACTCTTGTGTATGAGTATTTACCTAATGGAAGCCTTGAAGATCGTCTCAACCGCAAGGATAACACACCTCCACTATCATGGCAAACTCGAATTTGCATTGCTGCAGAACTTTGTTCTGCTCTCAATTTTCTTCACTCCAATAAACCTCACAGCATAGCGCATGGCGACTTAAAACCCGCCAACATTCTCCTCGATGCAAACCTTGTTAGCAAGCTCAGTGACTTTGGAATCTGCCGTATATTATCTTGTCAAGACAGTTCCAGTAATAGTACTACACAGTTTTGGAGGACTGTTCCAAAGGGAACTTTTGTGTATGTGGATCCTGAATTCCTTGCTTCTGGTGAACTTACACCAAAGTCAGATGTTTATTCATTTGGAATCATTTTATTGAGATTGATGACTGGGAAACCAGCCCTGGGAATAATAAAGGAAGTGCAATATGCATTAGATGCTGGAAAGTTGAAATCCATCTTGGATCCTTTGGCTGGAGAATGGCCATTTATGCTGGCTGAAGAGCTGATTCGCTTGGCTTTGAGGTGTTGCGAGATGAATCGGAAGAACCGGCCAGACCTTTATTCAGATGTTTGGAGGATACTGGAACCAATGAGGGCTTCTTCAAGAGTCACAAACACCTCTCAACTGGGTTCTCAAAGGCTATGCCAACCTCCTCCTTATTTTATTTGTCCAATCTTTCTGGAAGTCATGCAAGATCCACATGTAGCTTCGGATGGTTTTACTTATGAAGCTGAGGCTATACGCGAATGGCTGGAAAGTGGTCGTGACAATTCACCAAGGACAAATTCCAAGCTTGCTCATCGCAACCTTGTTCCCAACCACGCTCTTCGCCATGCGATCCAGAACTGGCTTCAAAGTCACTGA 2634 0.4074 MAVVSPMPATPPQVNPVNLLRNTGVPGIMTSRREIVNEPSPSMVNETIYVAVAKDVKDSKLNLIWAIQNSGGRRICILHVHVPAPMIPLALMGAKFPASALREEGVQDYHERERLKIHKTLDAYLFICQRMGVRARKLLHIEMDCIEKGIVELISRYGIQKLVMGAASDKYHSRRMTSLRSKKAIYVCEQAPASCHIQFICNGYLIHTRDCSLNRGNVEVEFPLLQQMANSEVGHSPNLSFQSILQGQNHGIKLTNPAQELFRRVRSVNDGHMRSLESVSSSEGFLTPPSKFSKNISSIEPGLTPNLINDGSENALDLILNDPSLINKDLHHSSSPSVLDEGMDDALYHQLEQVMAEASNARRDAYQETVRRGKAEKDAIDAIHRAKATENLYKEELKLRKEQEEAVEKANEKLNNMKSQTDKVNEELRLALDQNSSLENQIASTELMVKELKQKIIFALDLLQNYKDELDDLQIQRDNAVGEAEEFRRKQGEASSSTQELHCFSDFSFQEIKEATSNFNPSKKIGEGGYGSIFKGVLRHTEVAIKMLNPDSTQGPLEFQQEVEVLSKLRHPNLITLIGACTESWTLVYEYLPNGSLEDRLNRKDNTPPLSWQTRICIAAELCSALNFLHSNKPHSIAHGDLKPANILLDANLVSKLSDFGICRILSCQDSSSNSTTQFWRTVPKGTFVYVDPEFLASGELTPKSDVYSFGIILLRLMTGKPALGIIKEVQYALDAGKLKSILDPLAGEWPFMLAEELIRLALRCCEMNRKNRPDLYSDVWRILEPMRASSRVTNTSQLGSQRLCQPPPYFICPIFLEVMQDPHVASDGFTYEAEAIREWLESGRDNSPRTNSKLAHRNLVPNHALRHAIQNWLQSH 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00084 877 CDD STK_N 47 203 - -
Gma03g00084 877 Coils Coil 348 368 - -
Gma03g00084 877 SMART Ubox_2 810 873 IPR003613 GO:0004842|GO:0016567
Gma03g00084 877 Pfam Protein kinase domain 521 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00084 877 SMART serkin_6 519 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00084 877 Gene3D Phosphorylase Kinase; domain 1 489 591 - -
Gma03g00084 877 Coils Coil 385 490 - -
Gma03g00084 877 PANTHER U-BOX KINASE FAMILY PROTEIN 14 876 - -
Gma03g00084 877 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 806 877 IPR013083 -
Gma03g00084 877 Pfam U-box domain 808 877 IPR003613 GO:0004842|GO:0016567
Gma03g00084 877 ProSiteProfiles U-box domain profile. 806 877 IPR003613 GO:0004842|GO:0016567
Gma03g00084 877 CDD RING-Ubox_WDSUB1_like 811 852 - -
Gma03g00084 877 ProSiteProfiles Protein kinase domain profile. 519 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00084 877 ProSitePatterns Protein kinases ATP-binding region signature. 525 546 IPR017441 GO:0005524
Gma03g00084 877 SUPERFAMILY RING/U-box 801 876 - -
Gma03g00084 877 SUPERFAMILY Protein kinase-like (PK-like) 495 784 IPR011009 -
Gma03g00084 877 Gene3D Transferase(Phosphotransferase) domain 1 592 804 - -
Gma03g00084 877 PANTHER OS02G0152300 PROTEIN 14 876 - -
Gma03g00084 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00084 Gma-Chr3 958727 964017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00084 1 877 U-box Gene Family AT2G45910 51.348 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma03g00084 Pkinase 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00084 - - gmx:100780079 1712.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00084 03 958727 964017 Gma03g00084 03 958727 964017 ECH
Gma07g00645 07 6628151 6635315 Gma03g00084 03 958727 964017 ECH