Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00072 ATGGAAGATCAGGGTCAGCAGCAGCAGCAGCAGCATCAAGTGGAGGCAAAGAGTCCAAGGCAAGGCACCGAGAGGAGTGAAGCGGTTCGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATACTCGAGTCCATCTTCAACAGTGGCATGGTTAACCCTCCAAAGGACGAAACCGTCAGAATAAGGAAGCTTCTCGAGAAATTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAACAGCAGGCTACTGCCACCGCCACCGCCACCGTCACCACCTTTGATCACCCTCAGCCTCAGACTCAGACTCTTGTTAATGTTGGTGGTGCAATTCCACATGATCACCACACCTTGGGAAACCTTGTTGTTGCAACTGAAAGTAGTGCTACTTCAACCATGGGTTTTGGTTGTTCTTCTCAATCTTCTTATGGTTTTCTTGGTTCCTCTTCTTCTTCTTCTTCTTGTGGTGGTGGTGTAATTGGTGGCCAACAACAAGGCATGGATggtttcttctcatcggtttcttctcatcAAATGGGTTTCCCTGATCACCACCACACTTCACCTGCTTCATCAGCTTTGTACCCTCCTCTTGATCCAAATTTGACCTACCAGGCTGGATATGGGGGCCCTAATATTTCAGGATTCATTACAGTGTTTATCAATGGAATTGCAACTGAACTTCCAAAGGGGCCAATAGACCTCAAAACCGTGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTTCCAATTCCCACCAATGAATTTGGGTTCTTGATGCATAACCTTCAACATGGCGATAGCTACTTTCTGGTATCAAAGCCAACATAA 888 0.4718 MEDQGQQQQQQHQVEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQQATATATATVTTFDHPQPQTQTLVNVGGAIPHDHHTLGNLVVATESSATSTMGFGCSSQSSYGFLGSSSSSSSCGGGVIGGQQQGMDGFFSSVSSHQMGFPDHHHTSPASSALYPPLDPNLTYQAGYGGPNISGFITVFINGIATELPKGPIDLKTVFGEDVMLVHSSGVPIPTNEFGFLMHNLQHGDSYFLVSKPT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00072 295 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Gma03g00072 295 SUPERFAMILY Homeodomain-like 25 97 IPR009057 -
Gma03g00072 295 Gene3D - 30 97 - -
Gma03g00072 295 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Gma03g00072 295 SMART HOX_1 28 95 IPR001356 GO:0003677
Gma03g00072 295 MobiDBLite consensus disorder prediction 1 17 - -
Gma03g00072 295 MobiDBLite consensus disorder prediction 1 33 - -
Gma03g00072 295 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 294 IPR044558 GO:0003700|GO:0048830
Gma03g00072 295 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00072 Gma-Chr3 830325 832512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00072 2 291 Wox Gene Family AT3G03660 52.027 4.64e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma03g00072 Homeodomain 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00072 - - gmx:100818735 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00072 03 830325 832512 Gma03g00072 03 830325 832512 ECH