Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00058 ATGGGAAGCAGAAAGGAGGAAGAGAGGAACGAAAAAATCATCAGAGGTCTCATGAAGCTTCCTCCCAATCGAAGATGCATCAACTGTAATAGTCTGGGTCCACAATATGTTTGTGCGAATTTCTGGACCTTTGTTTGCATGACCTGCAGTGGTATACATCGTGAGTTTACCCATCGTGTGAAGTCTGTATCTATGGCAATGTTCACGTCACAAGAAGTTGATGCTCTTCAAAATGGGGGTAACCAGCGTGCAAGGGAAATACATTTGAAAAATTGGGACTTCCAAAGGCAGCGGTTGCCAGATAGCAGTAATGTTGATAAAGTAAGAGAGTTTATAAGGAATGTATATGTGGATCAAAGATATGCAGCAGCAAAGTCTTCTGATAAGCCTCCAAGAGATGTGCAGGCAATATATTTTTATCCTATTGAAGATGATACAAGGCGTGCCAGTTCCTATCACTCATATTCTCAAAGTCCTCCATATGATTACCAATATGAAGATCGACGATATGGAAAACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCTGATAAAGTTTGCTATGAAAGAAAGATAAGTAGTATTATCTTTAGTCCTGGTCGGTTCAGCGATCATGCGTATGATGACAGATTTGCAAATGAGAGATCTGGTCCTAGAATCTCCGACTTTTCTATGTCTAATGGTGGTGAGCAATTTAAAACTGATTTTCAGCATTCTGGTACCTGTTCAAGTAAAGATGTATTGCCTCATGTAACAAATACATCTCTGGAAACAAACTCCAAAAGAGATGCAGATGGAATTCATCGTCCACAGAGAACTACCTCATTGGGATCAACAGACAGCAACCTGTCATCCTTAAGATCTTACAGTTCTGGTGGTTTAGTTGATTTTTTCTCAGAACCATTCCAAGCTTCTGGACCCCATCAAAATAAAGTGTCTTGTACTCCACAACCATCTGATCTAGGAAGTACTGTTAGTTCAGATCTTTCTGAGGCACCAGTGGCACCCAAACCATTTTCTTCATCTGCTTCATCTATTGACCTTTTCCAGTTACCAGCTGCACCCTCTCAGGCTTCATCAGTGGATCTGTTTCAGTCATCTGCTTTATCTGCAATTGCATCTTTCAATGAGCGTCAACCTTTGAAAACATCCCAATCCTCATCTGTTGACTTTATGGACCTTTCTCAGCAGCCATCAGCTGCAACCTCAAGTGAGAAGTCACTGGAGTTGTCTGTCCCAGAAAATGAAGGATGGGCAACATTTGATATGCCTCAGCACACATCTACTGCACAAGTAGAAATTCAACCAGCAGTACAGGAAAAATTTGATCCATTTTTGAACTTAAATGCAAATACGCTATGGCCATGTTTTGAAACTTCTAGTGCTAGCGCTCTTTCTTCAGTTACATCTAATTTATGGCGTGATGTCACATGGACCAGAGAAGAACAAGTTTCTGTTACGGCATCAAACTCTCAATCATGGAGTGCATTTAAGGATCCTGCTAACTCTGTTCCTGTGGATGCTCTTATTACTCAAGGATCACAAATGCATGATCTTCCATCAACTGATGATCAGTTTTTGGATTTAAGAGCTTCTGAGGGATCCAATAAAGATGGTATGCACCGCATTGACCCTGTTGCTGGGTTTGATCATGATCTTTCATCGCATTTTGTTAGTGGCTCACCATGTCCTCCATCTGCATTTCCTCCAATGGGAGAGGTTCAGCCTAATGAAATCAACCATAAATCAACTAATCCATTTGATTATCCTTTTGATTCAGATGTAGAACATAATAATACGTGTCAATTGCAATTCCTTGACGTCAGCTCTCTACAAGCAGCTCTGCCAGATTCCCAGCTATCACCCACCTTCCAAAGTGGTATTGCTGAACCATGGCTCCCTCAGAATACACTGAACCCTTATTTCTCTTCTGCAGGACAAGGTGGTGGTTTGACATTCATGGCTGCACCACCACCAAGTTCTCAAATACTGAACATCCAGACGAATGAACCGGTTGCTTCTGTTGGGGGTAATCCCTTTGCATAG 2046 0.4174 MGSRKEEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCANFWTFVCMTCSGIHREFTHRVKSVSMAMFTSQEVDALQNGGNQRAREIHLKNWDFQRQRLPDSSNVDKVREFIRNVYVDQRYAAAKSSDKPPRDVQAIYFYPIEDDTRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKVCYERKISSIIFSPGRFSDHAYDDRFANERSGPRISDFSMSNGGEQFKTDFQHSGTCSSKDVLPHVTNTSLETNSKRDADGIHRPQRTTSLGSTDSNLSSLRSYSSGGLVDFFSEPFQASGPHQNKVSCTPQPSDLGSTVSSDLSEAPVAPKPFSSSASSIDLFQLPAAPSQASSVDLFQSSALSAIASFNERQPLKTSQSSSVDFMDLSQQPSAATSSEKSLELSVPENEGWATFDMPQHTSTAQVEIQPAVQEKFDPFLNLNANTLWPCFETSSASALSSVTSNLWRDVTWTREEQVSVTASNSQSWSAFKDPANSVPVDALITQGSQMHDLPSTDDQFLDLRASEGSNKDGMHRIDPVAGFDHDLSSHFVSGSPCPPSAFPPMGEVQPNEINHKSTNPFDYPFDSDVEHNNTCQLQFLDVSSLQAALPDSQLSPTFQSGIAEPWLPQNTLNPYFSSAGQGGGLTFMAAPPPSSQILNIQTNEPVASVGGNPFA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00058 681 MobiDBLite consensus disorder prediction 306 330 - -
Gma03g00058 681 Pfam Putative GTPase activating protein for Arf 12 124 IPR001164 GO:0005096
Gma03g00058 681 MobiDBLite consensus disorder prediction 306 337 - -
Gma03g00058 681 MobiDBLite consensus disorder prediction 219 260 - -
Gma03g00058 681 MobiDBLite consensus disorder prediction 216 282 - -
Gma03g00058 681 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Gma03g00058 681 Gene3D Arf GTPase activating protein 2 135 IPR038508 -
Gma03g00058 681 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Gma03g00058 681 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Gma03g00058 681 PANTHER ARFGAP/RECO-RELATED 1 681 IPR044820 GO:0005096
Gma03g00058 681 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Gma03g00058 681 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Gma03g00058 681 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Gma03g00058 681 CDD ArfGap_AGFG 11 123 - -
Gma03g00058 681 MobiDBLite consensus disorder prediction 384 408 - -
Gma03g00058 681 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00058 Gma-Chr3 670069 680757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00058 14 121 C2H2 Transcription Factor Family AT4G05330 33.613 9.85e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00058 K15044 - gmx:100817495 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00058 03 670069 680757 Gma03g00058 03 670069 680757 ECH