Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00037 ATGCTGATTCCCGGAAAATATATTCACAACATTAATTTCGCACTTCGCCCTCTGCCAACTACCAAGCTCCGGCTTCCTCTGCCAATTCAATCCGTCGTCGTTTTCGCCAATTCCGAATGCGTCGATTTCGGGTTGGAGAATGAGTTCTCCGACCTCTTCTTGGATCTCTGTTCAAACCGTCACACAGTCTCTGCGTTCGGATTCTCTTGTCCAATTTTAActctctctccctctctctctctctctctctcAGTTAGTATAACTACGTATCAGGCAAAGAAGTTTTCGCCGGCTAGCATGGTGCCGCATAAATCTCAAGGTGGTGTGGAGCAGCTTGCAAATGCTGGGGTTTTGGGAGGATCTGCTGTAAAAATTGCCGCTGCACCTGCTGGGGGAAGTGGGAAGCAGCGTTTGAGGTGGACATCTGATCTTCATGACCGTTTTGTCGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGCCTTGCAAAATACTTGCCTGAATCACCAGCTGATGGTAAAGACTCTAAAGATGAGAAGAGGAATTCTGGAGACAGCATTTCTGGCGCAGATTCTTCCCCGGGAATGCCAATCAATGATGCCCTAAGAATGCAGATGGAGGTTCAGAAACGTCTGCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAAAAGATCATAGAGGAACAGCAGAAATTAGGTAGTAACTTGACAACCTCGGAAGCACTTCCCTTGTCCCATGATGAGCAAAATCATCCTCAGTCAGAGGCTTCTGGATCTAGTGAGGCCCTTGCAAGCACTGTGTCTCCACTTAAAAAACAGAGAATCGATGATGGTTCCAAGGATGGCTTCACTGCTTCCCAAGTAAGAAATGCTGCACAAAAGAGTGACTGCAATGTTGGTCAGTTGGATCCAAACTTGTATGATGATGCTGGGTTTGAATTTGATTTGGAGACAAAAAAGGATGAAGATAATGAGAGTGGACAGTAA 1101 0.4369 MLIPGKYIHNINFALRPLPTTKLRLPLPIQSVVVFANSECVDFGLENEFSDLFLDLCSNRHTVSAFGFSCPILTLSPSLSLSLSVSITTYQAKKFSPASMVPHKSQGGVEQLANAGVLGGSAVKIAAAPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSISGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSNLTTSEALPLSHDEQNHPQSEASGSSEALASTVSPLKKQRIDDGSKDGFTASQVRNAAQKSDCNVGQLDPNLYDDAGFEFDLETKKDEDNESGQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00037 366 MobiDBLite consensus disorder prediction 283 305 - -
Gma03g00037 366 Coils Coil 226 246 - -
Gma03g00037 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 192 IPR017930 -
Gma03g00037 366 MobiDBLite consensus disorder prediction 195 212 - -
Gma03g00037 366 MobiDBLite consensus disorder prediction 194 225 - -
Gma03g00037 366 MobiDBLite consensus disorder prediction 283 366 - -
Gma03g00037 366 Pfam Myb-like DNA-binding domain 138 188 IPR001005 -
Gma03g00037 366 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 190 IPR006447 GO:0003677
Gma03g00037 366 MobiDBLite consensus disorder prediction 350 366 - -
Gma03g00037 366 Pfam MYB-CC type transfactor, LHEQLE motif 223 269 IPR025756 -
Gma03g00037 366 MobiDBLite consensus disorder prediction 321 338 - -
Gma03g00037 366 PANTHER OS05G0491500 PROTEIN 91 359 - -
Gma03g00037 366 SUPERFAMILY Homeodomain-like 134 189 IPR009057 -
Gma03g00037 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 91 359 IPR044848 GO:0003700
Gma03g00037 366 Gene3D - 134 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00037 Gma-Chr3 411051 416621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00037 113 300 G2-like Transcription Factor Family AT3G13040 46.392 6.74e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma03g00037 Myb_DNA-binding 4.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00037 - - gmx:100787389 511.146